BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317D01f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro... 28 8.8
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ... 28 8.8
>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
protein.
Length = 1000
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 385 CNSQWKNFRFLFFQCYLNITPSLPNS 308
CN+QW + FQC + TP L S
Sbjct: 122 CNNQWPDILQFLFQCANSPTPQLQES 147
>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
protein.
Length = 1105
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 385 CNSQWKNFRFLFFQCYLNITPSLPNS 308
CN+QW + FQC + TP L S
Sbjct: 122 CNNQWPDILQFLFQCANSPTPQLQES 147
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,984,984
Number of Sequences: 53049
Number of extensions: 282233
Number of successful extensions: 573
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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