Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS317C08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029280-1|ABK30917.1| 1191|Drosophila melanogaster IP14007p pro...   106   2e-23
AE014296-2642|AAF49534.1| 1191|Drosophila melanogaster CG12272-P...   106   2e-23

>BT029280-1|ABK30917.1| 1191|Drosophila melanogaster IP14007p
           protein.
          Length = 1191

 Score =  106 bits (254), Expect = 2e-23
 Identities = 62/138 (44%), Positives = 82/138 (59%), Gaps = 23/138 (16%)
 Frame = +2

Query: 176 QLQDEAFIQQNMETVIKDIEGKQLLCESLYLYGAMLLLCDLFIPGPMRERLLVAFYRYS- 352
           +L    +IQQ +ETV+++ EG+QLLCESLYL+G +LL+ D  IPG +RERLL+A+YRYS 
Sbjct: 113 ELNTGYYIQQTLETVLQEEEGRQLLCESLYLFGVILLMVDFHIPGDVRERLLIAYYRYSG 172

Query: 353 ----TSQSQSNIDDVCKLLRDTGY-------------DQQNAKRPA-----EYPVEYFSR 466
                S  +SNI DVC LLR TGY              +Q   R A      YP  YFSR
Sbjct: 173 GDATPSGDESNIHDVCLLLRSTGYVHPSIAAKVLGLGGKQAGARAASLVVPRYPEAYFSR 232

Query: 467 VNIRHDFIEKVLGKLRSD 520
                +F++ V+ +LR D
Sbjct: 233 FRFDENFVDLVVARLRCD 250



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 29/53 (54%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   ISHGNAIIAEILRLKDHNPKVYLLESREIQQKYQDVILDFSYFRISDAHEAKI 161
           +S GN+IIAEILRLKD+ P +Y L+++  + KY ++ILDFSYF+I++ HE +I
Sbjct: 18  VSVGNSIIAEILRLKDYVPSIYRLDNKADKAKYGELILDFSYFKIAEDHERRI 70


>AE014296-2642|AAF49534.1| 1191|Drosophila melanogaster CG12272-PA
           protein.
          Length = 1191

 Score =  106 bits (254), Expect = 2e-23
 Identities = 62/138 (44%), Positives = 82/138 (59%), Gaps = 23/138 (16%)
 Frame = +2

Query: 176 QLQDEAFIQQNMETVIKDIEGKQLLCESLYLYGAMLLLCDLFIPGPMRERLLVAFYRYS- 352
           +L    +IQQ +ETV+++ EG+QLLCESLYL+G +LL+ D  IPG +RERLL+A+YRYS 
Sbjct: 113 ELNTGYYIQQTLETVLQEEEGRQLLCESLYLFGVILLMVDFHIPGDVRERLLIAYYRYSG 172

Query: 353 ----TSQSQSNIDDVCKLLRDTGY-------------DQQNAKRPA-----EYPVEYFSR 466
                S  +SNI DVC LLR TGY              +Q   R A      YP  YFSR
Sbjct: 173 GDATPSGDESNIHDVCLLLRSTGYVHPSIAAKVLGLGGKQAGARAASLVVPRYPEAYFSR 232

Query: 467 VNIRHDFIEKVLGKLRSD 520
                +F++ V+ +LR D
Sbjct: 233 FRFDENFVDLVVARLRCD 250



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 29/53 (54%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   ISHGNAIIAEILRLKDHNPKVYLLESREIQQKYQDVILDFSYFRISDAHEAKI 161
           +S GN+IIAEILRLKD+ P +Y L+++  + KY ++ILDFSYF+I++ HE +I
Sbjct: 18  VSVGNSIIAEILRLKDYVPSIYRLDNKADKAKYGELILDFSYFKIAEDHERRI 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,360,013
Number of Sequences: 53049
Number of extensions: 442534
Number of successful extensions: 1011
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)