Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317C05f
(408 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 31 0.47
04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864 29 1.4
11_06_0710 - 26492093-26493460 29 1.9
11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553... 28 2.5
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 28 2.5
11_06_0542 + 24777453-24777632,24777654-24778478,24778576-247793... 28 3.3
11_06_0434 - 23512921-23513529 28 3.3
06_01_0124 - 958935-959967,959985-961222 28 3.3
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 28 3.3
07_03_1187 + 24667044-24667091,24667196-24667274,24667520-246676... 27 4.3
06_03_0046 - 15852653-15854560 27 4.3
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 27 4.3
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 27 4.3
06_03_0815 - 24905641-24905874,24905974-24906044,24906678-249068... 27 5.7
02_02_0473 - 10727908-10728052,10728367-10728440,10728660-107288... 27 5.7
12_01_1117 - 11922304-11922423,11922673-11922801,11923070-119231... 27 7.6
11_06_0291 + 22008412-22012284 27 7.6
11_01_0650 - 5265106-5265305,5265972-5266049,5266391-5266544,526... 27 7.6
09_06_0241 + 21803476-21803604,21804968-21805026,21805117-21805444 27 7.6
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 27 7.6
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 27 7.6
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 27 7.6
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 27 7.6
01_01_0850 - 6641980-6642163,6642791-6644091 27 7.6
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 30.7 bits (66), Expect = 0.47
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 11 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGD 118
D D + D++DED D ++ED+SS+D + +
Sbjct: 56 DDDDSDEDDSEDEDLSPEDDDDDSSEDDSSEDDEDE 91
>04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864
Length = 203
Score = 29.1 bits (62), Expect = 1.4
Identities = 25/110 (22%), Positives = 35/110 (31%), Gaps = 1/110 (0%)
Frame = +2
Query: 14 TDKAKISDNQDEDKKSSTGDGQTTEDESSQD-SKGDVKTTANXXXXXXXXXXXXXXXXXX 190
+D A +D DED GD E +D S+G+
Sbjct: 77 SDDAAPTDAGDEDGGDDDGDEDGDFGEGEEDVSEGEGYDNPKGIDNNKKRGEPEENGEED 136
Query: 191 XXXXXXXXNGETHDEDEKDDVKSNDXXXXXXXXXXXXXXEDTEEQDIEDD 340
G D+D+ DD +D E+ E+QD EDD
Sbjct: 137 EEEPEGQEGGGGDDDDDDDDDNEDDDDDDDGGEDDDGVDEEEEDQDNEDD 186
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 8 GDTDKAKISDNQDEDKKSSTG--DGQTTEDESSQDSKGD 118
GD D DN+D+D G D E+E QD++ D
Sbjct: 148 GDDDDDDDDDNEDDDDDDDGGEDDDGVDEEEEDQDNEDD 186
>11_06_0710 - 26492093-26493460
Length = 455
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 20 KAKISDNQDEDKKSSTGDGQTTEDESSQDSKG 115
K+K S + +ED+K S +GQ +D +G
Sbjct: 234 KSKSSSSDEEDEKKSKSEGQAAAKPKEEDEEG 265
>11_01_0678 -
5534879-5534883,5535430-5535529,5535638-5535799,
5536000-5536966,5537444-5537561,5538682-5538871,
5538952-5539107,5539296-5540315
Length = 905
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 35 DNQDEDKKSSTGDGQTTEDESSQDSKGD 118
D + ED D EDES +DS GD
Sbjct: 95 DEKGEDSDEDESDDDRGEDESDEDSDGD 122
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 11 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGD 118
D+D+ + D++ ED+ DG + DE S D + D
Sbjct: 100 DSDEDESDDDRGEDESDEDSDGDES-DEHSDDGESD 134
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 5 SGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSK 112
S D D + D++DED G+G+ +D+ ++ +
Sbjct: 118 SDDDDGGEDDDDEDEDGDDDEGEGEGEDDDEDEEEE 153
Score = 27.1 bits (57), Expect = 5.7
Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 4/115 (3%)
Frame = +2
Query: 8 GDTDKAK--ISDNQDEDKKSSTGDGQTTEDESSQDSKGDVKTTANXXXXXXXXXXXXXXX 181
GD D +S ++ E + DG++ +D + D + +
Sbjct: 44 GDRDLINRILSKSKTETVPENKDDGESDDDNDEEGDDEDAENQGDDDAGDEDASEEEGND 103
Query: 182 XXXXXXXXXXXNGETHDED--EKDDVKSNDXXXXXXXXXXXXXXEDTEEQDIEDD 340
G + D+D E DD + D ED EE++ EDD
Sbjct: 104 EDEDGDPEANGEGGSDDDDGGEDDDDEDEDGDDDEGEGEGEDDDEDEEEEEEEDD 158
>11_06_0542 +
24777453-24777632,24777654-24778478,24778576-24779319,
24779422-24780354,24780456-24780938,24780969-24781082,
24781240-24781636,24781732-24782024,24782392-24782802
Length = 1459
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 2 MSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGDVKTT 130
+ G+ K ++ Q+E K G TEDE Q G + T
Sbjct: 343 IEGNITKNSAAEEQEEKIKGEAAYGNKTEDEIPQTPDGSISKT 385
>11_06_0434 - 23512921-23513529
Length = 202
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 11 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQD 106
D+D ++ D+++++S D +T+EDE D
Sbjct: 165 DSDNEDDEESSDDEEETSEDDEETSEDEGHSD 196
>06_01_0124 - 958935-959967,959985-961222
Length = 756
Score = 27.9 bits (59), Expect = 3.3
Identities = 20/77 (25%), Positives = 41/77 (53%)
Frame = -3
Query: 265 IITLHIVFFIFIVCLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVTLRVLG*LIF 86
++ +IVF + ++ L ++ + G+I FI G I ++ G L +T + +F
Sbjct: 363 LLVNYIVFPVLVLGLCLMTVVLCGNGYIAFIAGSIKRDNYAVSFGL-LRMTSTPVAVALF 421
Query: 85 SCLTIASTGFLVFILIV 35
S + ++ T FL+F+ I+
Sbjct: 422 SSIDLSIT-FLLFLTIL 437
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +2
Query: 2 MSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGD 118
M + D+ + D D+D++ S +G+ ED+ ++ + D
Sbjct: 62 MGEEDDEEEDGDEDDDDEEYSDEEGEDDEDDEGEEDEED 100
>07_03_1187 +
24667044-24667091,24667196-24667274,24667520-24667695,
24668216-24668766,24669080-24669941
Length = 571
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = -3
Query: 187 FILFIFGVITAGLVILTVGCRLYVTLRVLG*LIFSCLTIASTGFLV 50
+I IFGVIT+G +++ + + V+ + + +C+ +A GFLV
Sbjct: 180 YICVIFGVITSGTIVVWI--QENVSWAIGYGVATACIALALIGFLV 223
>06_03_0046 - 15852653-15854560
Length = 635
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 7/41 (17%)
Frame = -2
Query: 170 WSHHRR-------SRHPYRWLSSLRHPSSPGMTHLQLFDHR 69
W HHR H Y ++ RHPS+ GM L+ HR
Sbjct: 379 WDHHRALISDHLFEVHMYEVRTAYRHPSAVGMFQLRSVMHR 419
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 7/41 (17%)
Frame = -2
Query: 170 WSHHRR-------SRHPYRWLSSLRHPSSPGMTHLQLFDHR 69
W HHR H Y ++ RHPS+ GM L+ HR
Sbjct: 380 WDHHRALISDYIFEVHMYEVRTAYRHPSTVGMFQLRSVMHR 420
>02_01_0459 +
3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +2
Query: 8 GDTDKAK---ISDNQDEDKKSSTGDGQTTEDESSQ 103
G+T+ ++ +SDN DE KK G ED Q
Sbjct: 73 GETNSSRSLSLSDNNDEKKKDKFSSGDEKEDHEKQ 107
>06_03_0815 -
24905641-24905874,24905974-24906044,24906678-24906847,
24906862-24906955,24907904-24907948,24908599-24909631
Length = 548
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 113 PSSPGMTHLQLFDHRQYWISCLHP 42
PS G+++LQLF H + W + + P
Sbjct: 40 PSRQGLSYLQLFRHEKGWYNGVTP 63
>02_02_0473 -
10727908-10728052,10728367-10728440,10728660-10728818,
10729606-10729774,10730216-10730355,10730469-10730879,
10731055-10731334,10731508-10731571,10731995-10733281,
10733363-10733822,10733988-10734356
Length = 1185
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 8 GDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGDVKTT 130
G D+ +I ++ + D + ED++S D +GDV T
Sbjct: 57 GMADEGEIVGIIVDEMEREDSDNEQAEDDASSDEEGDVMAT 97
>12_01_1117 -
11922304-11922423,11922673-11922801,11923070-11923155,
11923724-11923863,11923888-11924119,11924297-11924733,
11925240-11925559
Length = 487
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 26 KISDNQDEDKKSSTGDGQTTEDESSQDSKGDVKTT 130
+IS DE ++ D + ED++S D +GDV +T
Sbjct: 9 RISTIVDEMEREDL-DNEQAEDDASSDKEGDVMST 42
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 26.6 bits (56), Expect = 7.6
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +2
Query: 8 GDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGD 118
GD D+ + + ++DK + G+G+ E+ ++ G+
Sbjct: 417 GDGDREEGKEENEKDKGEADGEGEQEEEMKDKEKGGE 453
>11_01_0650 -
5265106-5265305,5265972-5266049,5266391-5266544,
5266635-5266701,5266723-5266796,5266910-5267794
Length = 485
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 11 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQD 106
D D + D++DED+ S D EDE S +
Sbjct: 444 DEDSYEDDDDKDEDEDSYEDDDDEDEDEDSYE 475
>09_06_0241 + 21803476-21803604,21804968-21805026,21805117-21805444
Length = 171
Score = 26.6 bits (56), Expect = 7.6
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 17 DKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGD 118
D+ ++ D+D + GDG + +++ D GD
Sbjct: 109 DEGGEDEDDDDDDPEANGDGGSDDEDDDDDDGGD 142
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 26.6 bits (56), Expect = 7.6
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +2
Query: 14 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSK 112
T + +ISD++DE++K +G+ + + ++ K
Sbjct: 214 TTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEK 246
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 26.6 bits (56), Expect = 7.6
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +2
Query: 14 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSK 112
T + +ISD++DE++K +G+ + + ++ K
Sbjct: 214 TTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEK 246
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 26.6 bits (56), Expect = 7.6
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +2
Query: 14 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSK 112
T + +ISD++DE++K +G+ + + ++ K
Sbjct: 214 TTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEK 246
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 14 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSK 112
TD+ + SD+ DE+ GD + E+E ++ +
Sbjct: 436 TDEDETSDDSDENFSDEEGDEEELEEEEEEEEE 468
>01_01_0850 - 6641980-6642163,6642791-6644091
Length = 494
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +2
Query: 29 ISDNQDEDKKSSTGDGQ---TTEDESSQD 106
ISDN+DED+ DG TE ESS D
Sbjct: 215 ISDNEDEDEDEDGVDGAHVVVTEIESSDD 243
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,500,599
Number of Sequences: 37544
Number of extensions: 115009
Number of successful extensions: 641
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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