Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS317C02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012437-1|AAS93708.1|  175|Drosophila melanogaster RH33661p pro...    59   4e-09
AE014297-1021|AAF54437.1|  252|Drosophila melanogaster CG12948-P...    59   4e-09
AY119450-1|AAM50104.1| 1281|Drosophila melanogaster AT20659p pro...    29   2.9  
AE013599-3486|AAF46913.1| 1815|Drosophila melanogaster CG13531-P...    29   2.9  
AY061322-1|AAL28870.1|  237|Drosophila melanogaster LD23881p pro...    29   3.8  
AE014297-3229|AAF56059.1|  237|Drosophila melanogaster CG6990-PA...    29   3.8  
AE014297-836|AAF54303.3| 1167|Drosophila melanogaster CG31349-PE...    29   3.8  

>BT012437-1|AAS93708.1|  175|Drosophila melanogaster RH33661p
           protein.
          Length = 175

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
 Frame = +3

Query: 330 MSAQGLTSEAQLRYLLQWFGEFSELQREDFLPV----LAASRSDNPEQ-----LAATMAN 482
           MS   L+ + + RY++QWF E+SELQR+DF+ V    LA   S          L  ++AN
Sbjct: 1   MSMSNLSIDGEFRYIIQWFNEWSELQRDDFVYVFVEYLARGSSSGASDGQVNGLVNSLAN 60

Query: 483 MTCQDKPVSLFQC 521
              QDKP+SLFQC
Sbjct: 61  AAVQDKPMSLFQC 73


>AE014297-1021|AAF54437.1|  252|Drosophila melanogaster CG12948-PA
           protein.
          Length = 252

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
 Frame = +3

Query: 330 MSAQGLTSEAQLRYLLQWFGEFSELQREDFLPV----LAASRSDNPEQ-----LAATMAN 482
           MS   L+ + + RY++QWF E+SELQR+DF+ V    LA   S          L  ++AN
Sbjct: 1   MSMSNLSIDGEFRYIIQWFNEWSELQRDDFVYVFVEYLARGSSSGASDGQVNGLVNSLAN 60

Query: 483 MTCQDKPVSLFQC 521
              QDKP+SLFQC
Sbjct: 61  AAVQDKPMSLFQC 73


>AY119450-1|AAM50104.1| 1281|Drosophila melanogaster AT20659p
           protein.
          Length = 1281

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = -2

Query: 508 LTGLS*QVIFAMVAANCSGLSDRDAASTGK-------KSSRCSSLNSPNHCKR 371
           LT  + Q +FA++  + + L D   A+T K        SS CSS+N   HC R
Sbjct: 182 LTHTARQDVFAIILCSTNSLPDELIATTPKFLEMMVGNSSHCSSINLLRHCIR 234


>AE013599-3486|AAF46913.1| 1815|Drosophila melanogaster CG13531-PB
           protein.
          Length = 1815

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = -2

Query: 508 LTGLS*QVIFAMVAANCSGLSDRDAASTGK-------KSSRCSSLNSPNHCKR 371
           LT  + Q +FA++  + + L D   A+T K        SS CSS+N   HC R
Sbjct: 716 LTHTARQDVFAIILCSTNSLPDELIATTPKFLEMMVGNSSHCSSINLLRHCIR 768


>AY061322-1|AAL28870.1|  237|Drosophila melanogaster LD23881p
           protein.
          Length = 237

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 300 KTEPRIITPRMSAQGLTSEAQLRYLLQWFG 389
           K EP  +  R+  + +TSE ++ Y ++W G
Sbjct: 3   KNEPNFVVERIMDKRITSEGKVEYYIKWRG 32


>AE014297-3229|AAF56059.1|  237|Drosophila melanogaster CG6990-PA
           protein.
          Length = 237

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 300 KTEPRIITPRMSAQGLTSEAQLRYLLQWFG 389
           K EP  +  R+  + +TSE ++ Y ++W G
Sbjct: 3   KNEPNFVVERIMDKRITSEGKVEYYIKWRG 32


>AE014297-836|AAF54303.3| 1167|Drosophila melanogaster CG31349-PE,
           isoform E protein.
          Length = 1167

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -2

Query: 472 VAANCSGLSDRDAASTGKKSSRCSSLNSPNHCKRYRN*ASEVRPCADI 329
           VA++ S  S   A S G  SSRC+S+N   +C       S   PC+ +
Sbjct: 83  VASSGSTASGGSAGSGGSGSSRCASVNGDANCDSRSLTPSGGGPCSGL 130


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,823,278
Number of Sequences: 53049
Number of extensions: 354902
Number of successful extensions: 1029
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)