Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317B10f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79996-1|BAA11491.2| 369|Homo sapiens KIAA0174 protein. 44 3e-04
BC103745-1|AAI03746.1| 366|Homo sapiens KIAA0174 protein protein. 44 3e-04
BC000116-1|AAH00116.1| 335|Homo sapiens KIAA0174 protein protein. 44 3e-04
AB097052-1|BAC77405.1| 364|Homo sapiens putative MAPK activatin... 44 3e-04
BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating p... 30 5.7
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 30 5.7
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 30 5.7
AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein pr... 30 5.7
AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif prot... 30 5.7
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 30 5.7
AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens ... 30 5.7
AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens ... 30 5.7
AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens ... 30 5.7
AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein. 30 5.7
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 30 5.7
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 30 5.7
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 30 5.7
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 30 5.7
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 30 5.7
AB210010-1|BAE06092.1| 1073|Homo sapiens SYMPK variant protein p... 29 9.9
>D79996-1|BAA11491.2| 369|Homo sapiens KIAA0174 protein.
Length = 369
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +1
Query: 61 ELPSVPSD----LVLPSVPXXXXXXXXXXXXXXPGPSDEIDFDDLNRRFEKLKKK 213
+LPS P+D VLP +P S++IDFDDL+RRFE+LKKK
Sbjct: 314 KLPSRPADNYDNFVLPELPSVPDTLPTASAGASTSASEDIDFDDLSRRFEELKKK 368
>BC103745-1|AAI03746.1| 366|Homo sapiens KIAA0174 protein protein.
Length = 366
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +1
Query: 61 ELPSVPSD----LVLPSVPXXXXXXXXXXXXXXPGPSDEIDFDDLNRRFEKLKKK 213
+LPS P+D VLP +P S++IDFDDL+RRFE+LKKK
Sbjct: 311 KLPSRPADNYDNFVLPELPSVPDTLPTASAGASTSASEDIDFDDLSRRFEELKKK 365
>BC000116-1|AAH00116.1| 335|Homo sapiens KIAA0174 protein protein.
Length = 335
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +1
Query: 61 ELPSVPSD----LVLPSVPXXXXXXXXXXXXXXPGPSDEIDFDDLNRRFEKLKKK 213
+LPS P+D VLP +P S++IDFDDL+RRFE+LKKK
Sbjct: 280 KLPSRPADNYDNFVLPELPSVPDTLPTASAGASTSASEDIDFDDLSRRFEELKKK 334
>AB097052-1|BAC77405.1| 364|Homo sapiens putative MAPK activating
protein protein.
Length = 364
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +1
Query: 61 ELPSVPSD----LVLPSVPXXXXXXXXXXXXXXPGPSDEIDFDDLNRRFEKLKKK 213
+LPS P+D VLP +P S++IDFDDL+RRFE+LKKK
Sbjct: 309 KLPSRPADNYDNFVLPELPSVPDTLPTASAGASTSASEDIDFDDLSRRFEELKKK 363
>BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating
protein 17 protein.
Length = 881
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 4 PTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
P P RS +PP+ + + P PS PS L P
Sbjct: 668 PKPPTRSPSPPTQHTGQPPGQPSAPSQLSAP 698
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 208 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 239
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 208 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 239
>AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein
protein.
Length = 414
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 4 PTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
P P RS +PP+ + + P PS PS L P
Sbjct: 201 PKPPTRSPSPPTQHTGQPPGQPSAPSQLSAP 231
>AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif protein
12 protein.
Length = 291
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 208 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 239
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 208 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 239
>AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens
cDNA FLJ43368 fis, clone NT2RP8000483, moderately
similar to Rattus norvegicus mRNA for Nadrin E2. ).
Length = 608
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 4 PTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
P P RS +PP+ + + P PS PS L P
Sbjct: 395 PKPPTRSPSPPTQHTGQPPGQPSAPSQLSAP 425
>AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ14661 fis, clone NT2RP2002710, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 803
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 4 PTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
P P RS +PP+ + + P PS PS L P
Sbjct: 590 PKPPTRSPSPPTQHTGQPPGQPSAPSQLSAP 620
>AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 726
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 4 PTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
P P RS +PP+ + + P PS PS L P
Sbjct: 513 PKPPTRSPSPPTQHTGQPPGQPSAPSQLSAP 543
>AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein.
Length = 803
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 4 PTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
P P RS +PP+ + + P PS PS L P
Sbjct: 590 PKPPTRSPSPPTQHTGQPPGQPSAPSQLSAP 620
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 208 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 239
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 208 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 239
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 208 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 239
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 208 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 239
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 1 VPTPQPRSRAPPSNYFPELPELPSVPSDLVLP 96
+P P P PP P +P +PSVP LP
Sbjct: 228 IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 259
>AB210010-1|BAE06092.1| 1073|Homo sapiens SYMPK variant protein
protein.
Length = 1073
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 22 SRAPPSNYFPELPELPSVPSDLVLPS 99
S PPS F LP LPS+P L+LPS
Sbjct: 1025 SHLPPSLLF--LPPLPSLPPSLLLPS 1048
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,041,614
Number of Sequences: 237096
Number of extensions: 982225
Number of successful extensions: 3306
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3266
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -