Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317B07f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1331|AAF58632.2| 857|Drosophila melanogaster CG30035-P... 50 3e-06
BT003466-1|AAO39469.1| 506|Drosophila melanogaster RH04286p pro... 40 0.003
BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p pro... 30 2.2
AY060861-1|AAL28409.1| 441|Drosophila melanogaster GM03427p pro... 30 2.2
AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA... 30 2.2
AY069842-1|AAL39987.1| 985|Drosophila melanogaster SD08921p pro... 29 2.9
AE014134-1469|AAF52648.2| 1355|Drosophila melanogaster CG7627-PA... 29 2.9
AE014297-1634|AAF54907.1| 329|Drosophila melanogaster CG10148-P... 29 5.1
AY094923-1|AAM11276.1| 665|Drosophila melanogaster RH42110p pro... 28 8.8
AE013599-405|AAF59259.1| 665|Drosophila melanogaster CG11123-PA... 28 8.8
>AE013599-1331|AAF58632.2| 857|Drosophila melanogaster CG30035-PA,
isoform A protein.
Length = 857
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Frame = +1
Query: 292 TRRHFQQLRQISLGNEFK---YKM-EMEIK-DENLRNSVPFVRQXSTDSVKTKTEYXNED 456
+R+HFQQ R IS + Y+M EM+ K EN+R++VPFVRQ + D K K E
Sbjct: 329 SRQHFQQQRSISTDSRKSRRLYEMDEMDNKRGENIRHAVPFVRQITEDG-KPKLEV---- 383
Query: 457 GTPYKSTTQKLFLWTXLLAA 516
Y+ TT +++WT +LAA
Sbjct: 384 ---YRPTTNPIYIWTQVLAA 400
>BT003466-1|AAO39469.1| 506|Drosophila melanogaster RH04286p
protein.
Length = 506
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 EMEIK-DENLRNSVPFVRQXSTDSVKTKTEYXNEDGTPYKSTTQKLFLWTXLLAA 516
EM+ K EN+R++VPFVRQ + D K K E Y+ TT +++WT +LAA
Sbjct: 3 EMDNKRGENIRHAVPFVRQITEDG-KPKLEV-------YRPTTNPIYIWTQVLAA 49
>BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p protein.
Length = 1434
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 53 RVEANKRVTHKGMKSGYTALVVPNTPGCLRNQRSQRQQPALPSQL 187
R+ + V HK ++ YTA+VV N + +Q P +P+ L
Sbjct: 1145 RMRKGRSVVHKTIEDNYTAVVVANHEALAQVLDQLQQTPVVPAAL 1189
>AY060861-1|AAL28409.1| 441|Drosophila melanogaster GM03427p
protein.
Length = 441
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 53 RVEANKRVTHKGMKSGYTALVVPNTPGCLRNQRSQRQQPALPSQL 187
R+ + V HK ++ YTA+VV N + +Q P +P+ L
Sbjct: 16 RMRKGRSVVHKTIEDNYTAVVVANHEALAQVLDQLQQTPVVPAAL 60
>AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA
protein.
Length = 1784
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 53 RVEANKRVTHKGMKSGYTALVVPNTPGCLRNQRSQRQQPALPSQL 187
R+ + V HK ++ YTA+VV N + +Q P +P+ L
Sbjct: 1359 RMRKGRSVVHKTIEDNYTAVVVANHEALAQVLDQLQQTPVVPAAL 1403
>AY069842-1|AAL39987.1| 985|Drosophila melanogaster SD08921p
protein.
Length = 985
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 49 FQGGSEQTRHAQGDEER 99
FQG +++T HA GDEER
Sbjct: 33 FQGSNQETVHADGDEER 49
>AE014134-1469|AAF52648.2| 1355|Drosophila melanogaster CG7627-PA
protein.
Length = 1355
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 49 FQGGSEQTRHAQGDEER 99
FQG +++T HA GDEER
Sbjct: 403 FQGSNQETVHADGDEER 419
>AE014297-1634|AAF54907.1| 329|Drosophila melanogaster CG10148-PA
protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 301 HFQQLRQISLGNEFKYKMEMEIKDENLRNSVPFV 402
+F QLRQ+ LGN + + + D N+ S+PFV
Sbjct: 140 NFNQLRQLDLGNNSLEVIPLSLADTNM--SLPFV 171
>AY094923-1|AAM11276.1| 665|Drosophila melanogaster RH42110p
protein.
Length = 665
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 89 MKSGYTALVVPNTPGCLRNQRSQRQQ-PALPSQLHV 193
+K GYT +V + CLR Q Q AL S LHV
Sbjct: 432 LKMGYTGVVSALSAACLRLATKQSQMIAALQSALHV 467
>AE013599-405|AAF59259.1| 665|Drosophila melanogaster CG11123-PA
protein.
Length = 665
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 89 MKSGYTALVVPNTPGCLRNQRSQRQQ-PALPSQLHV 193
+K GYT +V + CLR Q Q AL S LHV
Sbjct: 432 LKMGYTGVVSALSAACLRLATKQSQMIAALQSALHV 467
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,083,780
Number of Sequences: 53049
Number of extensions: 426480
Number of successful extensions: 1295
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -