Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317A12f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 1.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 1.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 1.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.5
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 22 3.3
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 3.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.8
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 5.8
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 7.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.7
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 7.7
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 21 7.7
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -1
Query: 521 FINNTLFILTPGDSSGISF-VCL 456
F+N+ LF++ DSSG F +C+
Sbjct: 16 FVNSFLFVIAAQDSSGRIFTICV 38
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -1
Query: 521 FINNTLFILTPGDSSGISF-VCL 456
F+N+ LF++ DSSG F +C+
Sbjct: 16 FVNSFLFVIAAQDSSGRIFTICV 38
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -1
Query: 521 FINNTLFILTPGDSSGISF-VCL 456
F+N+ LF++ DSSG F +C+
Sbjct: 16 FVNSFLFVIAAQDSSGRIFTICV 38
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 55 SDAEKSPVPPLPPRQSHKP 111
SD P PP PP S P
Sbjct: 335 SDTPPKPAPPPPPPSSSGP 353
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 125 CILSNGLCDCLGGK 84
CIL G CD +G K
Sbjct: 39 CILDRGHCDVIGKK 52
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 79 PPLPPRQSHKPLERMHALSPPQVPRHR 159
PPL Q H + H PQ +H+
Sbjct: 161 PPLVESQMHHQMHTQHPHMQPQQGQHQ 187
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 46 NVPSDAEKSPVPPLPPRQSH 105
N+P SP PP PP ++H
Sbjct: 1850 NIPVSG--SPEPPPPPPRNH 1867
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 390 VCFRGREGCDVLSSTPETGR 331
VC + CDV+S E GR
Sbjct: 438 VCLPPGQYCDVISGNLEKGR 457
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 97 QSHKPLERMHALSPPQVPRHRKPKRLTKP 183
+S L+ + L+P +HR PK L +P
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAPKFLGQP 29
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 140 GGDNACILSNGLCDCLGGKG 81
GGD + ++NG D LG G
Sbjct: 185 GGDISSFITNGEWDLLGVPG 204
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 116 RECMHYHLPKCLDIG 160
R+C L KCL +G
Sbjct: 237 RKCQECRLKKCLTVG 251
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 116 RECMHYHLPKCLDIG 160
R+C L KCL +G
Sbjct: 34 RKCQECRLKKCLTVG 48
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.311 0.127 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,142
Number of Sequences: 438
Number of extensions: 2846
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
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