Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317A04f
(440 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 151 3e-39
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 70 1e-14
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 56 2e-10
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.0
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 2.6
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 2.6
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 2.6
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 21 6.0
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 7.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 7.9
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 151 bits (366), Expect = 3e-39
Identities = 73/129 (56%), Positives = 92/129 (71%)
Frame = +1
Query: 52 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 231
+F+GK+YK+ SSENFD+FMK +GVG++TRK ++V+P VEL ++ Y L T+S FK TE
Sbjct: 3 DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62
Query: 232 MKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAAMTAK 411
+KFK GEEFEE+ DG KVKSVCT +GN L QVQK + T REF EMKA M
Sbjct: 63 IKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKVD 120
Query: 412 DVTXTRVYK 438
D+ TRVYK
Sbjct: 121 DIICTRVYK 129
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 69.7 bits (163), Expect = 1e-14
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Frame = +1
Query: 49 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 228
++F GK ++ S NF+EF K +G + P+ EL K+GDE+ +SS T
Sbjct: 2 VQFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTY 59
Query: 229 EMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAAM 402
FK FEE K ++V + EGNT K + D L+VT + EF E+ +
Sbjct: 60 TKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHI 119
Query: 403 TA--KDVTXTRVYK 438
+ DV TRVYK
Sbjct: 120 STNKSDVKATRVYK 133
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 56.0 bits (129), Expect = 2e-10
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +1
Query: 52 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 231
+F GK ++ S NF+EF K +G + P+ EL K+GDE+ +SS T
Sbjct: 1 QFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYT 58
Query: 232 MKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQKAPDGLEVT 360
FK FEE K ++V + EGNT K + D L+VT
Sbjct: 59 KTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 103
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.6 bits (46), Expect = 2.0
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -1
Query: 236 FISVVLKVEEVTKLYSSPSLRSSTV 162
FIS+++ +E+ + +SP L + T+
Sbjct: 9 FISLIILNDEIYNIIASPQLNNPTL 33
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 298 CTFEGNTLKQVQKAPDGL 351
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 298 CTFEGNTLKQVQKAPDGL 351
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 298 CTFEGNTLKQVQKAPDGL 351
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 313 NTLKQVQKAPDGLEVTYVREFGPEEMKAAMTAKDVT 420
+ +K + +PD +E ++ E + A+ KDV+
Sbjct: 184 SNIKVISISPDLVETDMTAQWLKENSRLALKPKDVS 219
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -3
Query: 399 RSFHLLRAEFPDVSDFKTVG 340
R+F+LLRA+ V++ ++ G
Sbjct: 116 RNFNLLRADANSVNELESQG 135
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 20.6 bits (41), Expect = 7.9
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 106 MKTIGVGLITRKAANAVTPTVELRKDGDEYN 198
MKTI G + V E K G EY+
Sbjct: 513 MKTIKKGSFVTQYVGEVITNEEAEKRGKEYD 543
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,146
Number of Sequences: 438
Number of extensions: 2068
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -