Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS316H08f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027845-1|BAB55408.1|  426|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AC006539-3|AAD14472.1|  498|Homo sapiens BC39498_1 protein.            29   9.9  
AC006539-2|AAD14470.1|  445|Homo sapiens BC39498_2 protein.            29   9.9  

>AK027845-1|BAB55408.1|  426|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14939 fis, clone PLACE1010702, moderately
           similar to ZINC FINGER PROTEIN 43. ).
          Length = 426

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 149 IALLKYSTSVVRNLHFQVDGKTRQSCKDLAERLQALGNC 33
           + L +Y +  + +LH + DG+    CKD  E    L  C
Sbjct: 22  VILRRYGSCGLEDLHLRKDGENVGECKDQKEIYNGLNQC 60


>AC006539-3|AAD14472.1|  498|Homo sapiens BC39498_1 protein.
          Length = 498

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 149 IALLKYSTSVVRNLHFQVDGKTRQSCKDLAERLQALGNC 33
           + L +Y +  + +LH + DG+    CKD  E    L  C
Sbjct: 98  VILRRYGSCGLEDLHLRKDGENVGECKDQKEIYNGLNQC 136


>AC006539-2|AAD14470.1|  445|Homo sapiens BC39498_2 protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 149 IALLKYSTSVVRNLHFQVDGKTRQSCKDLAERLQALGNC 33
           + L +Y +  + +LH + DG+    CKD  E    L  C
Sbjct: 45  VILRRYGSCGLEDLHLRKDGENVGECKDQKEIYNGLNQC 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,487,497
Number of Sequences: 237096
Number of extensions: 1280612
Number of successful extensions: 2152
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2152
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)