Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS316H04f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 26 0.20
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 1.9
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 1.9
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 22 3.3
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 22 3.3
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 3.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 5.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 5.8
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 7.7
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.7
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 26.2 bits (55), Expect = 0.20
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 163 QTPITKRERS-PSPSDCMSPDTINPPLSPADSTFSMASSGRDFDPRTRAFSDEELKPQPM 339
Q P R R SPSD P PA S+ S A + PR+ D+E++ P+
Sbjct: 564 QPPQCPRFRKLDSPSDSGIESGTEKPDKPASSSASSAPTSVCSSPRS---EDKEVEDMPV 620
Query: 340 IKK 348
+K+
Sbjct: 621 LKR 623
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 69 PR*VPVGERHAGRGPGQHAPGRLRVRAGAGPAD 167
P VPVG AG G PG GA +D
Sbjct: 54 PPSVPVGSAVAGTAGGALFPGMAAAGKGAARSD 86
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.0 bits (47), Expect = 1.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 187 RSPSPSD--CMSPDTINPPLSPADSTFSMASSG 279
R+P P D P ++PPL+ D+T + S G
Sbjct: 182 RTPDPHDETAKKPRVLSPPLNNNDATPTDFSMG 214
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 191 ERSRLVMGVCRPSAG 147
ER++ VMG C P++G
Sbjct: 105 ERAQSVMGKCLPTSG 119
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 191 ERSRLVMGVCRPSAG 147
ER++ VMG C P++G
Sbjct: 105 ERAQSVMGKCLPTSG 119
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 259 TWNRLVKAAG*WCPGSCSRRARESAP 182
TW LV G C G S RE++P
Sbjct: 3 TWLLLVVCLGIACQGITSVTVRENSP 28
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 5.8
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 166 TPITKRERSP--SPSDCMSPDTINPPLSPADSTFSMASSG 279
+P+++++ P S S T+ PP+S A++TF + G
Sbjct: 1830 SPMSEQKSLPRRGRSSRSSLRTLLPPISVAETTFVGGNQG 1869
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 5.8
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 166 TPITKRERSP--SPSDCMSPDTINPPLSPADSTFSMASSG 279
+P+++++ P S S T+ PP+S A++TF + G
Sbjct: 1826 SPMSEQKSLPRRGRSSRSSLRTLLPPISVAETTFVGGNQG 1865
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.0 bits (42), Expect = 7.7
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 166 TPITKRERSPSPSDCM 213
TP K+ + P P++C+
Sbjct: 26 TPRRKKNKKPLPTECV 41
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 7.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 451 CGVRRGTSW 425
CG+R G SW
Sbjct: 688 CGIRAGLSW 696
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 7.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 451 CGVRRGTSW 425
CG+R G SW
Sbjct: 726 CGIRAGLSW 734
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 235 PLSPADSTFSMASSGRDFDPRTRAFSDEEL 324
P+SP + +S+ASS P F EL
Sbjct: 426 PISPLNDWYSLASSWPALVPLALGFLAGEL 455
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.134 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,747
Number of Sequences: 438
Number of extensions: 3430
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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