Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS316F11f
         (456 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein.     29   7.6  
AB240570-1|BAE97426.1|  551|Homo sapiens decay-accelerating fact...    29   10.0 

>AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein.
          Length = 2982

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = -3

Query: 334  ILSIAIQRGNAASVMGTFGPGAIQSGLFE*PMSTRALLLAWTYMLLMTTPVAA--LPFSG 161
            ++S+A +      + G   PG + S LF    S +  LL+W Y+ L +T   A  L    
Sbjct: 957  LVSVAARECELLMLSGA--PGEVGSALFSLFWSVQGSLLSWCYLQLKSTDSGAKDLAVDL 1014

Query: 160  IELYGVSYLLSFSLSLHT 107
            IE Y   +L S    L +
Sbjct: 1015 IEKYVGQFLASMRAILES 1032


>AB240570-1|BAE97426.1|  551|Homo sapiens decay-accelerating factor
           splicing variant 5 protein.
          Length = 551

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 453 AARCLSIVHSPRTPWTSVTELYPKAYLTAT 364
           AAR  + VHSP T     T+ +P A++TAT
Sbjct: 469 AARKSTNVHSPVTNGLKSTQRFPSAHITAT 498


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,779,737
Number of Sequences: 237096
Number of extensions: 1559119
Number of successful extensions: 2614
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2613
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)