Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS316F06f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121633-1|AAM51960.1|  219|Drosophila melanogaster GM02293p pro...    85   7e-17
AF055900-1|AAC14276.1|  228|Drosophila melanogaster clathrin lig...    85   7e-17
AE014296-3305|AAF49047.1|  219|Drosophila melanogaster CG6948-PA...    85   7e-17
AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P...    32   0.54 
BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p pro...    28   8.8  
AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-P...    28   8.8  
AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-P...    28   8.8  

>AY121633-1|AAM51960.1|  219|Drosophila melanogaster GM02293p
           protein.
          Length = 219

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 63/157 (40%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
 Frame = +3

Query: 54  DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAISTS---------TNGF 197
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST          T   
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASE 61

Query: 198 DDFVEV-------PSASAFDANGLLDDAPLG-SXPTTVFKQEREEPEKIKIWREEQKKRL 353
            D +          S  +F+  G   + P+G S P       REEPEKI+ WREEQK+RL
Sbjct: 62  GDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPP----SREEPEKIRKWREEQKQRL 117

Query: 354 XXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTK 464
                        + Q +KKEL+DW +   E ISKTK
Sbjct: 118 EEKDIEEERKKEELRQQSKKELDDWLRQIGESISKTK 154


>AF055900-1|AAC14276.1|  228|Drosophila melanogaster clathrin light
           chain protein.
          Length = 228

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 63/157 (40%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
 Frame = +3

Query: 54  DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAISTS---------TNGF 197
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST          T   
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASE 61

Query: 198 DDFVEV-------PSASAFDANGLLDDAPLG-SXPTTVFKQEREEPEKIKIWREEQKKRL 353
            D +          S  +F+  G   + P+G S P       REEPEKI+ WREEQK+RL
Sbjct: 62  GDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPP----SREEPEKIRKWREEQKQRL 117

Query: 354 XXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTK 464
                        + Q +KKEL+DW +   E ISKTK
Sbjct: 118 EEKDIEEERKKEELRQQSKKELDDWLRQIGESISKTK 154


>AE014296-3305|AAF49047.1|  219|Drosophila melanogaster CG6948-PA
           protein.
          Length = 219

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 63/157 (40%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
 Frame = +3

Query: 54  DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAISTS---------TNGF 197
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST          T   
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASE 61

Query: 198 DDFVEV-------PSASAFDANGLLDDAPLG-SXPTTVFKQEREEPEKIKIWREEQKKRL 353
            D +          S  +F+  G   + P+G S P       REEPEKI+ WREEQK+RL
Sbjct: 62  GDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPP----SREEPEKIRKWREEQKQRL 117

Query: 354 XXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTK 464
                        + Q +KKEL+DW +   E ISKTK
Sbjct: 118 EEKDIEEERKKEELRQQSKKELDDWLRQIGESISKTK 154


>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
            protein.
          Length = 2768

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 20/67 (29%), Positives = 33/67 (49%)
 Frame = +3

Query: 105  LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSXPTT 284
            ++ E  ++   ED+L +S    AI++ST G  D     ++SA    G  D+A   + PT 
Sbjct: 835  ISEESTEVPVAEDDLSSSTSASAIASSTEGVQDAASETTSSAPARAGDKDEAAT-TVPTA 893

Query: 285  VFKQERE 305
              K + E
Sbjct: 894  QDKDDEE 900


>BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p
           protein.
          Length = 1240

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 105 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 227
           LA E       ED++  + P P   T      +FVEVP A+
Sbjct: 20  LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60


>AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-PB,
           isoform B protein.
          Length = 1431

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 105 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 227
           LA E       ED++  + P P   T      +FVEVP A+
Sbjct: 20  LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60


>AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-PA,
           isoform A protein.
          Length = 1431

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 105 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 227
           LA E       ED++  + P P   T      +FVEVP A+
Sbjct: 20  LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,918,988
Number of Sequences: 53049
Number of extensions: 392751
Number of successful extensions: 1716
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)