Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS316F06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light ... 45 3e-05
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 37 0.010
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 37 0.010
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 0.87
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 0.87
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 28 4.7
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 4.7
U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 4.7
U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical p... 27 6.2
L10986-7|AAA28014.2| 362|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 27 8.1
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 8.1
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 8.1
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 8.1
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 27 8.1
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 8.1
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 8.1
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 8.1
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 8.1
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 8.1
>U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light
chain protein 1 protein.
Length = 226
Score = 45.2 bits (102), Expect = 3e-05
Identities = 50/163 (30%), Positives = 68/163 (41%), Gaps = 41/163 (25%)
Frame = +3
Query: 87 DPAADFLAREQNQLAGLE-----------DELETSAPPPAISTSTNGF----DDFVEV-- 215
DP ADFLAREQN A + D E AP PA+ D+ V
Sbjct: 3 DPVADFLAREQNLFADFDGAPPAAAAANPDAPEADAPAPALDDDFGDLQIAGDEPPPVVH 62
Query: 216 PSASAFDANGLLDD---APL-------------------GSX-PTTVFKQ-EREEPEKIK 323
P+ S D +GL+DD AP GS P+ + R E EKI+
Sbjct: 63 PTDSGVDLDGLVDDNAAAPAIVVPAVEPMVNGNHSASSGGSKGPSPILSTVPRIEAEKIR 122
Query: 324 IWREEQKKRLXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQI 452
+W+ +Q++ L + AKKELE+WYK E+ +
Sbjct: 123 LWKAQQEQLLSKKDEAEEKKKIELRANAKKELEEWYKQREKTL 165
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 114 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 263
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 114 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 263
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 203
P V P + + +N AGL D LE + PA +N FDD
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAPSNIFDD 371
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 203
P V P + + +N AGL D LE + PA +N FDD
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAPSNIFDD 371
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 111 REQNQLAGLEDELE-TSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSXPTT 284
R + G DE + APPP S+ G+D+ PSA A D AP G PT+
Sbjct: 80 RARRPARGAYDEGDYKEAPPPTSYPSSGGYDE----PSAPAHDT---APQAPAGPAPTS 131
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 114 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 260
++ A L DE S PP + +NGFD S S+ NG L DA
Sbjct: 606 QKRSAAALIDEQSRSPPPAKRAHLSNGFD-----KSKSSVSTNGTLGDA 649
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 114 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 260
++ A L DE S PP + +NGFD S S+ NG L DA
Sbjct: 1669 QKRSAAALIDEQSRSPPPAKRAHLSNGFD-----KSKSSVSTNGTLGDA 1712
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 27.9 bits (59), Expect = 4.7
Identities = 29/103 (28%), Positives = 45/103 (43%)
Frame = +3
Query: 150 ETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSXPTTVFKQEREEPEKIKIW 329
E + P IS +TN ++ + +S D +L AP+ + + +EE +K K+
Sbjct: 333 ELAYDPSRISNATNDYEAIQKEKYSSITDEYVVLPAAPVKTFAVRI----QEEKQK-KLD 387
Query: 330 REEQKKRLXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISK 458
EEQ+K L M + ELED K EE+ K
Sbjct: 388 EEEQQKVLKIQELEKQKDEQIMKSML--ELEDMKKLLEEKDEK 428
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 138 EDELETSAP-PPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSXPTTVFKQ-EREEP 311
+DE + SA PP +S N DD +VPS SA A + + + P + Q +EP
Sbjct: 1768 DDETQDSAEAPPVLSAEVNS-DDSNDVPSTSA--AAAVSSETAADAEPASAEDQAPTDEP 1824
Query: 312 EKIK 323
E ++
Sbjct: 1825 EPME 1828
>U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical
protein F08B1.3 protein.
Length = 460
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 265 NGASSNRPLASNADALGTSTKSSNPFVDV 179
NG+ +NR ++ + D GT T SS+P + +
Sbjct: 415 NGSRTNRSVSCSPDECGTLTDSSDPHLTI 443
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 138 EDELETSAP-PPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSXPTTVFKQ-EREEP 311
+DE + SA PP +S N DD +VPS SA A + + + P + Q +EP
Sbjct: 1768 DDETQDSAEAPPVLSAEVNS-DDSNDVPSTSA--AAAVSSETAADAEPASAEDQAPTDEP 1824
Query: 312 EKIK 323
E ++
Sbjct: 1825 EPME 1828
>U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical
protein F37A4.9 protein.
Length = 418
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 87 DPAADFLAREQNQLAGLE--DELETSAPPPAISTSTNGFDDFVEVPSASAFDA 239
D DF + +++ L DELE++ PP AI + F + + PS ++ D+
Sbjct: 358 DVLLDFFSNHKHECMKLTAWDELESAKPPLAIKILRDAFSN-TDSPSTTSMDS 409
>L10986-7|AAA28014.2| 362|Caenorhabditis elegans Hypothetical
protein F10E9.3 protein.
Length = 362
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 268 PNGASSNRPLASNADALGTSTKSSNPFVDVE 176
P A S P + ++ + GTST SSN +DV+
Sbjct: 242 PPSAVSPAPGSGSSASSGTSTSSSNGIIDVQ 272
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 111 REQNQLAGLEDELETSAP--PPAISTSTNGFDDFVEVPSASAFDANGLLDD 257
++ Q+ G+E E + PP + +D + P + FD +G +DD
Sbjct: 36 QQNQQIQGIEQTGEPNGDNQPPQLVIDQLSYDQQQQQPKQNCFDTHGNMDD 86
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 392 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 450
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 606 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 664
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 742 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 800
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 783 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 841
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 794 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 852
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 78 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 254
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 795 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 853
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,650,453
Number of Sequences: 27780
Number of extensions: 199434
Number of successful extensions: 842
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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