Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS316F02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z92970-3|CAB07482.1| 383|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z79753-3|CAB02088.1| 377|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U32305-16|AAN63464.1| 275|Caenorhabditis elegans Hypothetical p... 36 0.018
U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical p... 36 0.018
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 33 0.16
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 33 0.16
Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical p... 30 0.87
Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 30 0.87
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 30 0.87
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 30 0.87
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 30 0.87
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 30 0.87
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 30 0.87
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 30 0.87
Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 30 0.87
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 30 0.87
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 29 1.5
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 29 1.5
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL021066-1|CAH10789.1| 181|Caenorhabditis elegans Hypothetical ... 28 4.7
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 27 6.2
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 27 6.2
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 27 6.2
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 6.2
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 6.2
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 27 6.2
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 6.2
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 27 6.2
AL110500-15|CAD92406.1| 209|Caenorhabditis elegans Hypothetical... 27 6.2
Z81517-6|CAB04213.2| 327|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z50796-3|CAA90667.1| 184|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF179358-1|AAF13868.1| 184|Caenorhabditis elegans cyclin-depend... 27 8.1
AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical
protein T23G5.2a protein.
Length = 719
Score = 70.5 bits (165), Expect = 7e-13
Identities = 37/100 (37%), Positives = 56/100 (56%)
Frame = +3
Query: 168 NDHFLLRWLRARQWDPEAAEKMLRDSLKWREKWEVDTTLPSWQAPEVLEKHFPSGSTGFD 347
ND LLR+LRAR +D A+ M+ S+ WR++ VD L W P V++++FP D
Sbjct: 276 NDAHLLRFLRARDFDVAKAKDMVHASIIWRKQHNVDKILEEWTRPTVIKQYFPGCWHNSD 335
Query: 348 KEGSPVIIVPFVGLDVWGLLHSFTRTEVIRMILKHLENYL 467
K G P+ I+ F LD G+L S ++++ L E+ L
Sbjct: 336 KAGRPMYILRFGQLDTKGMLRSCGVENLVKLTLSICEDGL 375
>Z92970-3|CAB07482.1| 383|Caenorhabditis elegans Hypothetical
protein H06O01.3 protein.
Length = 383
Score = 64.9 bits (151), Expect = 3e-11
Identities = 35/111 (31%), Positives = 58/111 (52%)
Frame = +3
Query: 168 NDHFLLRWLRARQWDPEAAEKMLRDSLKWREKWEVDTTLPSWQAPEVLEKHFPSGSTGFD 347
ND ++LRWLRA++ + + L+ + +R W +D + W PE LEK+ G G D
Sbjct: 31 NDGYVLRWLRAKEGRFDETAESLKKHVTFRNAWHLD-KIEQWTPPECLEKYCGYGLLG-D 88
Query: 348 KEGSPVIIVPFVGLDVWGLLHSFTRTEVIRMILKHLENYLAIARKQALTHG 500
EG P+++ +DV GLL S + I+ L +E + + ++A G
Sbjct: 89 TEGRPILMSLLGNVDVEGLLRSVASLDYIKFSLAAIEKGMKLCEEKAKESG 139
>Z79753-3|CAB02088.1| 377|Caenorhabditis elegans Hypothetical
protein F20G2.3 protein.
Length = 377
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Frame = +3
Query: 90 VGIDDDQRFALMKFRRSVKDVLRPEHNDHF-LLRWLRARQWDPEAAEKMLRDSLKWREK- 263
+ I + R A+ + R +VK+ L P ++ F LLRWL+ + + + L + L +R+
Sbjct: 1 MSISESDRVAINELREAVKEHLTPYYDTDFNLLRWLKGHDYKMDVIKPKLINHLLFRKSD 60
Query: 264 WEVDTTLPSWQAPEVLEKHFPSGSTGFDKE-GSPVIIVPFVGL-DVWGLLHSFTRTEVIR 437
W++D+ L + H+ +G TG + ++ + G D WG+LHS+ E++R
Sbjct: 61 WDLDS-LADKPRDHPVHHHWKTGLTGESGIIPNTIVNIEQTGSNDYWGMLHSYPTNEILR 119
Query: 438 MILKHLENYL 467
+ LE+ L
Sbjct: 120 ARVHDLESML 129
>Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical
protein F28H7.8 protein.
Length = 410
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Frame = +3
Query: 66 MAPMSNAVVGIDDDQRFALMKFRRSVKDVLRPEHNDHF-LLRWLRARQWDPEAAEKMLRD 242
MAP + + V I++ A+ + R V DV+ P ++ + +LRWL++ ++ +L+
Sbjct: 1 MAPNALSPVDIENMNDAAIEQVRLQVSDVIDPRYDTKWNMLRWLQSNDFNIPKTVHLLKK 60
Query: 243 SLKWREKWEVD--TTLPSWQAPEVLEKHFPSGSTGFDK--EGSPVIIVPFVG-LDVWGLL 407
LKWR+ ++D + Q + KH P G + +G +++V G +DV GL+
Sbjct: 61 HLKWRKDRKLDEPESQSLLQFSDARRKHAPIDIIGPQRKEDGDRLVVVDRAGRIDVSGLM 120
Query: 408 HSFTRTEVIRMILKHLE 458
S TE + + + E
Sbjct: 121 KSVQPTEYLHEMFRSFE 137
>U32305-16|AAN63464.1| 275|Caenorhabditis elegans Hypothetical
protein B0336.11b protein.
Length = 275
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 147 DVLRPEHNDHFLLRWLRARQWDPEAAEKMLRDSLKWREKWEVD 275
DV R H D +L R+L + +D + A ++ + LKWR +EVD
Sbjct: 48 DVHRIRHEDWWLDRFLGSVNYDVDIAYAIMLECLKWRRNFEVD 90
>U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical
protein B0336.11a protein.
Length = 567
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 147 DVLRPEHNDHFLLRWLRARQWDPEAAEKMLRDSLKWREKWEVD 275
DV R H D +L R+L + +D + A ++ + LKWR +EVD
Sbjct: 48 DVHRIRHEDWWLDRFLGSVNYDVDIAYAIMLECLKWRRNFEVD 90
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -3
Query: 465 GSSPNVSKSFE*LQSW*RSAVDPTHPDQRMEQLSLVSLP 349
G + +S+E L++ +S VDP PD R++Q+ + +LP
Sbjct: 1069 GENGGYGRSYESLRAIEQSVVDPRSPDYRLKQVKISALP 1107
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -3
Query: 465 GSSPNVSKSFE*LQSW*RSAVDPTHPDQRMEQLSLVSLP 349
G + +S+E L++ +S VDP PD R++Q+ + +LP
Sbjct: 1069 GENGGYGRSYESLRAIEQSVVDPRSPDYRLKQVKISALP 1107
>Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 363
>Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 363
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 363
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 273 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 329
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 330 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 373
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 277 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 333
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 334 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 377
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 335 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 391
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 392 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 435
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 293 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 349
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 350 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 393
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 301 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 357
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 358 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 401
>Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 363
>Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 363
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 363
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 273 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 329
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 330 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 373
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 277 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 333
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 334 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 377
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 335 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 391
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 392 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 435
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 293 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 349
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 350 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 393
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 301 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 357
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 358 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 401
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 30.3 bits (65), Expect = 0.87
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 421 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 245
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 244 ESLNIFSAA--SGSHCRALNHLNKKWSLCSGLNTSLTLLRNFIR 119
+ I + + + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIR 363
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 29.5 bits (63), Expect = 1.5
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 11/153 (7%)
Frame = +3
Query: 75 MSNAVVGIDDDQRFALMKFRRSVKDVLR--PEHNDHF-LLRWLRARQWDPEAAEKMLRDS 245
MS + I + R L + R+ + L E++D F L+RWL + ++ S
Sbjct: 13 MSTSTGEITESDRKLLDELRKRIHKELELVKEYDDDFSLMRWLIGWDRKIDVVVPKIKFS 72
Query: 246 LKWREKWEVD----TTLPSWQAP----EVLEKHFPSGSTGFDKEGSPVIIVPFVGLDVWG 401
L+ +D +TL V ++ P G D E + V + LD G
Sbjct: 73 LRAIHALGLDQEDLSTLEKVAQKCDDCSVPLRYLPGSLIGLDHENNVVSLQMIGHLDAAG 132
Query: 402 LLHSFTRTEVIRMILKHLENYLAIARKQALTHG 500
L+ + +++ RM + E + I RK G
Sbjct: 133 LMPATRNSDLYRMRIAESEGVMQIIRKMEKEQG 165
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 432 IRMILKHLENYLAIARKQALTHG 500
I M+ KHL Y A+AR+Q HG
Sbjct: 670 IEMLEKHLSRYKALARRQKTMHG 692
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 432 IRMILKHLENYLAIARKQALTHG 500
I M+ KHL Y A+AR+Q HG
Sbjct: 670 IEMLEKHLSRYKALARRQKTMHG 692
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 207 WDPEAAEKMLRDSLKWREKWEVDTTLPSWQAPEVLEK 317
W+ EK+L KW WE+ P + E + K
Sbjct: 54 WNIGTPEKLLEHKNKWHPGWEIPYEAPVYDKKEYIYK 90
>AL021066-1|CAH10789.1| 181|Caenorhabditis elegans Hypothetical
protein H31B20.1 protein.
Length = 181
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 403 RPHTSRPTNGTIITGEPSLSKPVLPLGKCFSR 308
RP R T+ T T P+ KP +PLGK F+R
Sbjct: 128 RPRFVR-TSTTTSTLSPTSEKPPMPLGKYFAR 158
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KRFIEMAREMGSRHNSAELAGTRSSRKTLSQ 328
K++I+ E+G H E+ RSS+ T+ Q
Sbjct: 1427 KQYIDKGIELGDEHKMIEILALRSSKITVDQ 1457
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KRFIEMAREMGSRHNSAELAGTRSSRKTLSQ 328
K++I+ E+G H E+ RSS+ T+ Q
Sbjct: 1433 KQYIDKGIELGDEHKMIEILALRSSKITVDQ 1463
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KRFIEMAREMGSRHNSAELAGTRSSRKTLSQ 328
K++I+ E+G H E+ RSS+ T+ Q
Sbjct: 1433 KQYIDKGIELGDEHKMIEILALRSSKITVDQ 1463
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 476 CYSEVVLQMFQNHSNDFSPGEGVQ*TPHIQTNEWNNY 366
C EVVL+ ++DF E P + NEW++Y
Sbjct: 406 CKLEVVLRREAGATSDFRAAEWRWSMPEVCDNEWHSY 442
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 379 NGTIITGEPSLSKPVLPLGK 320
+GT+I G P ++KPV P GK
Sbjct: 8707 DGTVIEGPPKVAKPVGPDGK 8726
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 379 NGTIITGEPSLSKPVLPLGK 320
+GT+I G P ++KPV P GK
Sbjct: 8752 DGTVIEGPPKVAKPVGPDGK 8771
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KRFIEMAREMGSRHNSAELAGTRSSRKTLSQ 328
K++I+ E+G H E+ RSS+ T+ Q
Sbjct: 1433 KQYIDKGIELGDEHKMIEILALRSSKITVDQ 1463
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 379 NGTIITGEPSLSKPVLPLGK 320
+GT+I G P ++KPV P GK
Sbjct: 8752 DGTVIEGPPKVAKPVGPDGK 8771
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 476 CYSEVVLQMFQNHSNDFSPGEGVQ*TPHIQTNEWNNY 366
C EVVL+ ++DF E P + NEW++Y
Sbjct: 406 CKLEVVLRREAGATSDFRAAEWRWSMPEVCDNEWHSY 442
>AL110500-15|CAD92406.1| 209|Caenorhabditis elegans Hypothetical
protein Y87G2A.15 protein.
Length = 209
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = -2
Query: 421 LVKECSRP--HTSRPTNGTIITGEPSLSKPVLPLGKCFSRTSG--AC--QLGRVVSTSHF 260
L+++ SR H + + ++ +P ++ PL +C++ TSG C +L +V+S +
Sbjct: 74 LIEDASRQRKHRAPYVDEPVLAAKPKYAEHKYPLKQCYTETSGFMCCNPKLEKVMSETAL 133
Query: 259 SRHFNESLNIFSAAS 215
++S N+ +S
Sbjct: 134 KMKSSKSCNLQKMSS 148
>Z81517-6|CAB04213.2| 327|Caenorhabditis elegans Hypothetical
protein F28B1.6 protein.
Length = 327
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -3
Query: 366 SLVSLPCR-SPCCRWESVFLELRVPANSAELCLLPISLAISMNLLTSSLRLLGPIVELLT 190
+LVSL C SPC SV ++ +ELCLL + +N++ S L P L
Sbjct: 247 TLVSLICSTSPCILGFSVMTKMENAQIISELCLLGFACHSPVNVI-SLLIFSPPYRRFLE 305
Query: 189 ILIKNGH 169
L + G+
Sbjct: 306 KLFRRGN 312
>Z50796-3|CAA90667.1| 184|Caenorhabditis elegans Hypothetical
protein T05A6.1 protein.
Length = 184
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 195 RARQWDPEAAEKMLRD-SLKWREKWEVDTTLPS 290
R R W +A ++M ++ S KW +E++T LPS
Sbjct: 19 RTRIWLEDAVKRMRQEESQKWGFDFELETPLPS 51
>AF179358-1|AAF13868.1| 184|Caenorhabditis elegans cyclin-dependent
kinase inhibitor protein.
Length = 184
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 195 RARQWDPEAAEKMLRD-SLKWREKWEVDTTLPS 290
R R W +A ++M ++ S KW +E++T LPS
Sbjct: 19 RTRIWLEDAVKRMRQEESQKWGFDFELETPLPS 51
>AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical
protein Y22D7AR.7 protein.
Length = 767
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 193 NHLNKKWSLCSGLNTSLTLLR 131
+HL K WS+CS S TLL+
Sbjct: 616 HHLYKSWSMCSVPENSKTLLK 636
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,572,812
Number of Sequences: 27780
Number of extensions: 270712
Number of successful extensions: 862
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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