Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS316E12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein. 93 5e-19
AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for S... 93 5e-19
AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for S... 93 5e-19
AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for S... 93 5e-19
AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein. 93 5e-19
AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor int... 93 5e-19
AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein. 93 5e-19
AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for S... 91 2e-18
>BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein.
Length = 1359
Score = 93.1 bits (221), Expect = 5e-19
Identities = 36/62 (58%), Positives = 51/62 (82%)
Frame = +3
Query: 9 YELLAHIDKSQTHLQYMDPICDLLYHIKYMFVGDTLKNEVENVXRKLRPALQMRLRFITH 188
Y++L ++D+ THL YMDPICD LYH+KYMF GD++K +VE + L+PAL++RLRFITH
Sbjct: 1275 YDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITH 1334
Query: 189 LN 194
++
Sbjct: 1335 IS 1336
>AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1368
Score = 93.1 bits (221), Expect = 5e-19
Identities = 36/62 (58%), Positives = 51/62 (82%)
Frame = +3
Query: 9 YELLAHIDKSQTHLQYMDPICDLLYHIKYMFVGDTLKNEVENVXRKLRPALQMRLRFITH 188
Y++L ++D+ THL YMDPICD LYH+KYMF GD++K +VE + L+PAL++RLRFITH
Sbjct: 1275 YDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITH 1334
Query: 189 LN 194
++
Sbjct: 1335 IS 1336
>AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1364
Score = 93.1 bits (221), Expect = 5e-19
Identities = 36/62 (58%), Positives = 51/62 (82%)
Frame = +3
Query: 9 YELLAHIDKSQTHLQYMDPICDLLYHIKYMFVGDTLKNEVENVXRKLRPALQMRLRFITH 188
Y++L ++D+ THL YMDPICD LYH+KYMF GD++K +VE + L+PAL++RLRFITH
Sbjct: 1275 YDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITH 1334
Query: 189 LN 194
++
Sbjct: 1335 IS 1336
>AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1365
Score = 93.1 bits (221), Expect = 5e-19
Identities = 36/62 (58%), Positives = 51/62 (82%)
Frame = +3
Query: 9 YELLAHIDKSQTHLQYMDPICDLLYHIKYMFVGDTLKNEVENVXRKLRPALQMRLRFITH 188
Y++L ++D+ THL YMDPICD LYH+KYMF GD++K +VE + L+PAL++RLRFITH
Sbjct: 1281 YDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITH 1340
Query: 189 LN 194
++
Sbjct: 1341 IS 1342
>AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein.
Length = 1364
Score = 93.1 bits (221), Expect = 5e-19
Identities = 36/62 (58%), Positives = 51/62 (82%)
Frame = +3
Query: 9 YELLAHIDKSQTHLQYMDPICDLLYHIKYMFVGDTLKNEVENVXRKLRPALQMRLRFITH 188
Y++L ++D+ THL YMDPICD LYH+KYMF GD++K +VE + L+PAL++RLRFITH
Sbjct: 1275 YDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITH 1334
Query: 189 LN 194
++
Sbjct: 1335 IS 1336
>AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor
interacting protein protein.
Length = 1368
Score = 93.1 bits (221), Expect = 5e-19
Identities = 36/62 (58%), Positives = 51/62 (82%)
Frame = +3
Query: 9 YELLAHIDKSQTHLQYMDPICDLLYHIKYMFVGDTLKNEVENVXRKLRPALQMRLRFITH 188
Y++L ++D+ THL YMDPICD LYH+KYMF GD++K +VE + L+PAL++RLRFITH
Sbjct: 1275 YDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITH 1334
Query: 189 LN 194
++
Sbjct: 1335 IS 1336
>AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein.
Length = 1421
Score = 93.1 bits (221), Expect = 5e-19
Identities = 36/62 (58%), Positives = 51/62 (82%)
Frame = +3
Query: 9 YELLAHIDKSQTHLQYMDPICDLLYHIKYMFVGDTLKNEVENVXRKLRPALQMRLRFITH 188
Y++L ++D+ THL YMDPICD LYH+KYMF GD++K +VE + L+PAL++RLRFITH
Sbjct: 1328 YDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITH 1387
Query: 189 LN 194
++
Sbjct: 1388 IS 1389
>AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1374
Score = 91.5 bits (217), Expect = 2e-18
Identities = 35/62 (56%), Positives = 51/62 (82%)
Frame = +3
Query: 9 YELLAHIDKSQTHLQYMDPICDLLYHIKYMFVGDTLKNEVENVXRKLRPALQMRLRFITH 188
Y++L ++D+ THL YMDPICD LYH+KYMF GD++K +V+ + L+PAL++RLRFITH
Sbjct: 1281 YDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVKKIICNLKPALKLRLRFITH 1340
Query: 189 LN 194
++
Sbjct: 1341 IS 1342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,965,888
Number of Sequences: 237096
Number of extensions: 1071589
Number of successful extensions: 1486
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -