Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS316E02f
         (457 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   0.90 
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   3.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   4.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   4.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.4  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 3   NARLLHYS*TYNSVFGRLER 62
           N   +HY+  Y+S++GR +R
Sbjct: 592 NQAAIHYNLPYSSLYGRFKR 611


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 60  RCNEPRVDVRKTGDFTIVSNGLAVSRG 140
           +CN+ + D+ +TG      +G   SRG
Sbjct: 67  QCNDKKTDIEETGRGKGRGHGKGGSRG 93


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 377 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           +  +R Y K+HN K     + +    N  SR+R
Sbjct: 12  YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 377 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 279
           +  +R Y K+HN K     + +    N  SR+R
Sbjct: 12  YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 428  DGVDKHTELVSWK 390
            D +D+HT  V+WK
Sbjct: 986  DDLDQHTLKVTWK 998


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
          protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 73 GSLHLSKRPKTLLYVHE*CNKRAF 2
          G L+L  RP   +YV +  NK AF
Sbjct: 7  GILYLFDRPSEPVYVPKGDNKVAF 30


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 215 YENDVLFFIYNRQFNDA 165
           Y+N +++ IY R F D+
Sbjct: 27  YKNALVYQIYPRSFQDS 43


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 243 GAMVLPARQVRKRR 202
           G   +P R++RKRR
Sbjct: 257 GTTTIPTRRLRKRR 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,486
Number of Sequences: 438
Number of extensions: 2372
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)