Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS316C01f
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   5.4  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    23   5.4  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    23   5.4  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    23   5.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    22   7.2  

>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 24  VYGCYWWHDFPP 59
           V+GC++WH   P
Sbjct: 185 VWGCFFWHGTGP 196


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -2

Query: 161 SPNK*AHLTFPRSKP*ASRQSMYLASSFWQRPRSWWEIMP 42
           +P +   +T+P+S    S  +    +    RP+  WE+ P
Sbjct: 45  APEQTIKITYPQSDVEVSLGNQLTPTQVKARPKLCWEVEP 84


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +1

Query: 76  QKEEARYMDCLEAYG-LERGKVKCAHLFGDYHECSTLTKQLKRFLAI 213
           +K+ A    CL     L   K +C H    + +C   T   K FLA+
Sbjct: 220 KKDNAETNVCLTNLNKLACHKTRCEHATDVFSQCFGNTDLYKHFLAV 266


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +1

Query: 76  QKEEARYMDCLEAYG-LERGKVKCAHLFGDYHECSTLTKQLKRFLAI 213
           +K+ A    CL     L   K +C H    + +C   T   K FLA+
Sbjct: 220 KKDNAETNVCLTNLNKLACHKTRCEHATDVFSQCFGNTDLYKHFLAV 266


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 169 ECSTLTKQLKRFLAIRHERQRQISQGKLTGDEKYVSPRVD 288
           EC  LTK +     I    +++    ++  D KYV+  +D
Sbjct: 618 ECPELTKAMDGVTYIADHTRKEEESSRVKEDWKYVAMVLD 657


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,580
Number of Sequences: 2352
Number of extensions: 8739
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)