Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS316C01f
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456904-1|CAG33185.1| 106|Homo sapiens NDUFS5 protein. 48 2e-05
BC093057-1|AAH93057.1| 106|Homo sapiens NADH dehydrogenase (ubi... 48 2e-05
BC001884-1|AAH01884.1| 106|Homo sapiens NADH dehydrogenase (ubi... 48 2e-05
AL606465-3|CAI16711.1| 106|Homo sapiens NADH dehydrogenase (ubi... 48 2e-05
AF020352-1|AAB87866.1| 106|Homo sapiens NADH:ubiquinone oxidore... 48 2e-05
AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein pr... 30 2.5
AK125995-1|BAC86384.1| 842|Homo sapiens protein ( Homo sapiens ... 30 2.5
AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein. 30 2.5
>CR456904-1|CAG33185.1| 106|Homo sapiens NDUFS5 protein.
Length = 106
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 34 VTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAI 213
+ G +++ GRC E +++C G R + +C + D+ EC K ++R I
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 214 RHERQRQISQGKLT 255
R +R + I +GK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>BC093057-1|AAH93057.1| 106|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
reductas protein.
Length = 106
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 34 VTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAI 213
+ G +++ GRC E +++C G R + +C + D+ EC K ++R I
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 214 RHERQRQISQGKLT 255
R +R + I +GK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>BC001884-1|AAH01884.1| 106|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
reductas protein.
Length = 106
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 34 VTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAI 213
+ G +++ GRC E +++C G R + +C + D+ EC K ++R I
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 214 RHERQRQISQGKLT 255
R +R + I +GK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>AL606465-3|CAI16711.1| 106|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
reductas protein.
Length = 106
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 34 VTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAI 213
+ G +++ GRC E +++C G R + +C + D+ EC K ++R I
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 214 RHERQRQISQGKLT 255
R +R + I +GK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>AF020352-1|AAB87866.1| 106|Homo sapiens NADH:ubiquinone
oxidoreductase 15 kDa IP subunit protein.
Length = 106
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 34 VTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAI 213
+ G +++ GRC E +++C G R + +C + D+ EC K ++R I
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 214 RHERQRQISQGKLT 255
R +R + I +GK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein
protein.
Length = 992
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 76 QKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAIRHERQ 228
QKEEA+ CL R K H+ G HE S+L ++ ++ + HER+
Sbjct: 575 QKEEAQLQKCLGQVE-HRVHQKSYHVAGYEHELSSLLREKRQEVEGEHERR 624
>AK125995-1|BAC86384.1| 842|Homo sapiens protein ( Homo sapiens
cDNA FLJ44007 fis, clone TESTI4023762. ).
Length = 842
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 76 QKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAIRHERQ 228
QKEEA+ CL R K H+ G HE S+L ++ ++ + HER+
Sbjct: 683 QKEEAQLQKCLGQVE-HRVHQKSYHVAGYEHELSSLLREKRQEVEGEHERR 732
>AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein.
Length = 1456
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 76 QKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAIRHERQ 228
QKEEA+ CL R K H+ G HE S+L ++ ++ + HER+
Sbjct: 805 QKEEAQLQKCLGQVE-HRVHQKSYHVAGYEHELSSLLREKRQEVEGEHERR 854
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,503,174
Number of Sequences: 237096
Number of extensions: 1201950
Number of successful extensions: 5938
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5938
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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