Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS316B02f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0710 - 26492093-26493460                                         27   9.1  
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723...    27   9.1  

>11_06_0710 - 26492093-26493460
          Length = 455

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
 Frame = +3

Query: 39  KKMQKGKRKS----DEDGVSSPKKKKLNNSHEQDXXXXXXXXXXXXXXXXXXXDGVKGFK 206
           KK +K K KS    D+D     KKK  N+  ++D                   D  K  K
Sbjct: 139 KKKKKSKSKSSDDDDDDAEKKSKKKSKNSDDDED--DKKKSKKKPKNPDDDEDDKKKSKK 196

Query: 207 KFTKNDK-GSKFVKTKEKSNFSKDE 278
           K +  D  G+K  K K+    S DE
Sbjct: 197 KSSDEDNDGAKKKKKKKSKGKSSDE 221


>09_05_0014 -
           20071514-20071690,20071779-20071894,20072177-20072315,
           20072649-20072672,20072879-20072989,20073089-20073239,
           20073357-20073478,20074287-20074556
          Length = 369

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 445 VLKSDFTTFLCICAANNLALCE 380
           +L+ D TTF+C+C    L+L E
Sbjct: 223 LLEKDLTTFVCVCIPEFLSLYE 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,117,584
Number of Sequences: 37544
Number of extensions: 83617
Number of successful extensions: 283
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)