Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS316A10f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 76 3e-16
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.62
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.62
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.62
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 4.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 4.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 4.4
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 5.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 5.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 5.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 5.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 5.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 5.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 5.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 5.8
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 7.7
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 75.8 bits (178), Expect = 3e-16
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = -3
Query: 519 FPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTY 340
+P IH + Q +R FK + ILVAT + RG+DI+ V+ V NYD+P+ D Y
Sbjct: 476 YPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEY 535
Query: 339 LHRVARAGRFGTKGLAITMISDENDAKI 256
+HR+ R GR G +G A + E DA +
Sbjct: 536 VHRIGRTGRVGNRGRATSFFDPEEDAPL 563
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.62
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 217 CNVHIETILYLV*DLGIIFIRYHSNGQTF 303
CN + +T++Y+ + G I YH++ +F
Sbjct: 195 CNTNSDTMVYIADEKGEGLIVYHNSDDSF 223
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.62
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 217 CNVHIETILYLV*DLGIIFIRYHSNGQTF 303
CN + +T++Y+ + G I YH++ +F
Sbjct: 195 CNTNSDTMVYIADEKGEGLIVYHNSDDSF 223
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.62
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 217 CNVHIETILYLV*DLGIIFIRYHSNGQTF 303
CN + +T++Y+ + G I YH++ +F
Sbjct: 195 CNTNSDTMVYIADEKGEGLIVYHNSDDSF 223
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 4.4
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +2
Query: 257 ILASFSSDIIVMARPLVPNLPARATRCRYVSESSGMS*LKTIFTL 391
IL SFS RP P YV S +S +K FTL
Sbjct: 15 ILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTL 59
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 208 RQLCNVHIETILYLV*DL 261
RQLC++ IE+ Y + D+
Sbjct: 149 RQLCHIEIESFGYTMRDI 166
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 208 RQLCNVHIETILYLV*DL 261
RQLC++ IE+ Y + D+
Sbjct: 149 RQLCHIEIESFGYTMRDI 166
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 208 RQLCNVHIETILYLV*DL 261
RQLC++ IE+ Y + D+
Sbjct: 88 RQLCHIEIESFGYTMRDI 105
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 158 IPIPIYCCGSF 126
IP+PIY CG+F
Sbjct: 119 IPVPIY-CGNF 128
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 158 IPIPIYCCGSF 126
IP+PIY CG+F
Sbjct: 119 IPVPIY-CGNF 128
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 158 IPIPIYCCGSF 126
IP+PIY CG+F
Sbjct: 119 IPVPIY-CGNF 128
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 158 IPIPIYCCGSF 126
IP+PIY CG+F
Sbjct: 121 IPVPIY-CGNF 130
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 158 IPIPIYCCGSF 126
+PIPIY CG+F
Sbjct: 336 VPIPIY-CGNF 345
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 158 IPIPIYCCGSF 126
+PIPIY CG+F
Sbjct: 347 VPIPIY-CGNF 356
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 158 IPIPIYCCGSF 126
+PIPIY CG+F
Sbjct: 347 VPIPIY-CGNF 356
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 158 IPIPIYCCGSF 126
+PIPIY CG+F
Sbjct: 336 VPIPIY-CGNF 345
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 176 DDRLSFIPIPIYCCGSFC 123
DD++ F P+ C S C
Sbjct: 1698 DDKICFTMRPVVSCASGC 1715
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,547
Number of Sequences: 438
Number of extensions: 3263
Number of successful extensions: 28
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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