Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS316A07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   5.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   5.8  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   5.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   5.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   5.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   5.8  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   5.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   5.8  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   7.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 284 HVLIN*TNLTSTSGKYRKYI 343
           H LI     T TSGKY++YI
Sbjct: 181 HALIFGKLDTKTSGKYKEYI 200


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 284 HVLIN*TNLTSTSGKYRKYI 343
           H LI     T TSGKY++YI
Sbjct: 181 HALIFGKLDTKTSGKYKEYI 200


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 137 TSYEHNTLTCKNARFQYNNHS 199
           +S  +NT+   N ++ YNN++
Sbjct: 82  SSLSNNTIHNNNYKYNYNNNN 102


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 137 TSYEHNTLTCKNARFQYNNHS 199
           +S  +NT+   N ++ YNN++
Sbjct: 82  SSLSNNTIHNNNYKYNYNNNN 102


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 137 TSYEHNTLTCKNARFQYNNHS 199
           +S  +NT+   N ++ YNN++
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNN 103


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 137 TSYEHNTLTCKNARFQYNNHS 199
           +S  +NT+   N ++ YNN++
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNN 103


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 137 TSYEHNTLTCKNARFQYNNHS 199
           +S  +NT+   N ++ YNN++
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNN 103


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 137 TSYEHNTLTCKNARFQYNNHS 199
           +S  +NT+   N ++ YNN++
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNN 103


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 225 MAVLKLNLFIKVYCQLIHTYTYLLI 299
           M +  ++L   +YC L+H  T  ++
Sbjct: 1   MKITIVSLLCVIYCALVHADTVAIL 25


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 225 MAVLKLNLFIKVYCQLIHTYTYLLI 299
           M +  ++L   +YC L+H  T  ++
Sbjct: 1   MKITIVSLLCVIYCALVHADTVAIL 25


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 119 NRNITKFVTLCSNRYRSIHYSI 54
           N N   +  L  N YR ++Y+I
Sbjct: 90  NYNNNNYKKLYCNNYRKLYYNI 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,988
Number of Sequences: 438
Number of extensions: 2700
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)