Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315H09f
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 82 1e-16
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 77 4e-15
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 72 1e-13
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 71 3e-13
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 66 5e-12
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 66 5e-12
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 33 0.047
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 33 0.083
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 33 0.083
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 33 0.083
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 30 0.58
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 29 0.77
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 29 0.77
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 29 1.3
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 29 1.3
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 27 5.4
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 27 5.4
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 26 7.2
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 81.8 bits (193), Expect = 1e-16
Identities = 43/98 (43%), Positives = 58/98 (59%)
Frame = +2
Query: 35 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFK 214
+ EFVG+ +K+ SENF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 215 TTEMKFKPGXXXXXXXXXXXXVKSVCTFEGXTLKQVQK 328
T + FK G VKSV FE +QK
Sbjct: 60 NTTLSFKLGQEFDETTPDGRTVKSVVNFENGKFIHIQK 97
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 77.0 bits (181), Expect = 4e-15
Identities = 40/94 (42%), Positives = 55/94 (58%)
Frame = +2
Query: 44 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFKTTE 223
+F+G+ +K+ +ENFDE+MK IGVGLITRKAA + P +E+R DG+ + STFK T+
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 224 MKFKPGXXXXXXXXXXXXVKSVCTFEGXTLKQVQ 325
+ FK G S+ TFE L Q
Sbjct: 65 LSFKLGEEFVENSPDDRTYNSLFTFENGKLTHRQ 98
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 72.1 bits (169), Expect = 1e-13
Identities = 36/95 (37%), Positives = 57/95 (60%)
Frame = +2
Query: 44 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFKTTE 223
+FVG+ +K+ SENF++++K +GVGL+ RKAA A PT+E++ +G+++ + STFK T
Sbjct: 5 QFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTT 63
Query: 224 MKFKPGXXXXXXXXXXXXVKSVCTFEGXTLKQVQK 328
++F G KS T E + VQK
Sbjct: 64 LEFTLGVEFDETTPDGRQFKSTITIEDGKVVHVQK 98
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 70.5 bits (165), Expect = 3e-13
Identities = 31/64 (48%), Positives = 47/64 (73%)
Frame = +2
Query: 44 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFKTTE 223
EF+G+ +K+ SENF+E++K IGVGL+ RKAA+ +PT+E++ DGD + STFK +
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 224 MKFK 235
+ FK
Sbjct: 65 LAFK 68
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 66.5 bits (155), Expect = 5e-12
Identities = 36/102 (35%), Positives = 53/102 (51%)
Frame = +2
Query: 35 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFK 214
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 3 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 61
Query: 215 TTEMKFKPGXXXXXXXXXXXXVKSVCTFEGXTLKQVQKXPDG 340
+K+K G V SV + E L Q++ G
Sbjct: 62 NYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQIETGKGG 103
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 66.5 bits (155), Expect = 5e-12
Identities = 36/102 (35%), Positives = 53/102 (51%)
Frame = +2
Query: 35 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFK 214
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 18 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 76
Query: 215 TTEMKFKPGXXXXXXXXXXXXVKSVCTFEGXTLKQVQKXPDG 340
+K+K G V SV + E L Q++ G
Sbjct: 77 NYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQIETGKGG 118
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 33.5 bits (73), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 32 SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYXLVTSS 205
S+ +F G+ Y++ SENFDEF+ + GV R+ +T + ++ +Y + +
Sbjct: 2 SVPDKFFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLT 60
Query: 206 TFKTT 220
+ K T
Sbjct: 61 SKKNT 65
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 32.7 bits (71), Expect = 0.083
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 74 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFKTTEMKFKP 238
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 32.7 bits (71), Expect = 0.083
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 74 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFKTTEMKFKP 238
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 32.7 bits (71), Expect = 0.083
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 74 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFKTTEMKFKP 238
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -2
Query: 240 PGLNFISVVLKVEEVTKXYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSS 88
PGL F S++ K VT S +L SST + +A+ I PT +F NSS
Sbjct: 842 PGL-FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSS 891
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 29.5 bits (63), Expect = 0.77
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 35 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRK 133
I +F GK Y + SENFDEF+ GV R+
Sbjct: 8 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQ 39
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 29.5 bits (63), Expect = 0.77
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 35 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRK 133
I +F GK Y + SENFDEF+ GV R+
Sbjct: 23 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQ 54
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 62 YKMTSSENFDEFMKTIGVGLITRKAANAVT 151
+ + SENFDE++ G G TRK T
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 59
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 62 YKMTSSENFDEFMKTIGVGLITRKAANAVT 151
+ + SENFDE++ G G TRK T
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 57
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 80 ENFDEFMKTIGVGLITRKAANAVTPTVELRKDGD-EYXLVTSS 205
EN+ F++ G R N ++P VEL D D EY L S
Sbjct: 298 ENYTLFIRKNEHGEAVRTVKNVISPHVELGLDPDSEYVLTLQS 340
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
protein T04A11.3 protein.
Length = 1014
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 80 ENFDEFMKTIGVGLITRKAANAVTPTVELRKDGD-EYXLVTSS 205
EN+ F++ G R N ++P VEL D D EY L S
Sbjct: 119 ENYTLFIRKNEHGEAVRTVKNVISPHVELGLDPDSEYVLTLQS 161
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 80 ENFDEFMKTIGVGLITRKAANAVTPTVELRKDGD-EYXLVTSS 205
EN+ F++ G R N ++P VEL D D EY L S
Sbjct: 298 ENYTLFIRKNEHGEAVRTVKNVISPHVELGLDPDSEYVLTLQS 340
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 52 RQEIQDDFLREL**VHEDHRRGSDHPQSR 138
RQEI+D FL++ +H D R S SR
Sbjct: 31 RQEIRDAFLKKTKQLHPDQSRKSSKSDSR 59
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +2
Query: 41 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYXLVTSSTFKTT 220
M +GK++K T+ NF +F + GV L E + D++ S TF
Sbjct: 230 MADMGKEWKRTTKHNFRDFWASSGVPLDMLMTFLDREIEAEYIDEDDQFFTGVSETFNVK 289
Query: 221 EMK 229
+ +
Sbjct: 290 DSR 292
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 204 EEVTKXYSSPSLRSSTVGVTALAA 133
EE+TK P+ +++TV ALAA
Sbjct: 157 EEITKGEQKPAAKAATVDTVALAA 180
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 75 PPRTLMSS*RPSAWV*SPAKPP 140
PP+ L RP+ WV PAK P
Sbjct: 409 PPKNLALEARPARWVPIPAKRP 430
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,462,240
Number of Sequences: 27780
Number of extensions: 131254
Number of successful extensions: 372
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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