Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS315H07f
         (390 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL512764-1|CAC21681.1|  793|Homo sapiens hypothetical protein pr...    31   1.3  
BC044647-1|AAH44647.1|  406|Homo sapiens heparan sulfate (glucos...    29   7.1  
AY358838-1|AAQ89197.1|  406|Homo sapiens HS3ST3A1 protein.             29   7.1  
AF105376-1|AAD30208.1|  406|Homo sapiens heparan sulfate D-gluco...    29   7.1  
M87869-1|AAA61074.1|   79|Homo sapiens T-cell receptor alpha pro...    28   9.3  

>AL512764-1|CAC21681.1|  793|Homo sapiens hypothetical protein
           protein.
          Length = 793

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = -2

Query: 254 RQIVIANRILKTSRTPVRISTTNFLYHKNALHLSSLIDSGFCATFVSGPSAVRKNTGMLL 75
           R++V   R+L  +  P+R +  +    ++ALH   L   G C   V  P+A R+  G   
Sbjct: 654 RRLVCGRRVLGGAGPPLRGAHWHAGLLRHALHRLRL--RGHCRAAVPAPAAHRRRAGRPA 711

Query: 74  RVRAAGTRAL 45
           R +A   RAL
Sbjct: 712 RTQARHHRAL 721


>BC044647-1|AAH44647.1|  406|Homo sapiens heparan sulfate
           (glucosamine) 3-O-sulfotransferase 3A1 protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +1

Query: 214 RLVFRMRFAITICRVTVCQMYRLYCYHVECPPIGQ*IVIVSGGEARGGA 360
           R +FR +F + +C + +  +Y  YC    C  +   +V +SGG    GA
Sbjct: 19  RSIFR-KFLLMLCSL-LTSLYVFYCLAERCQTLSGPVVGLSGGGEEAGA 65


>AY358838-1|AAQ89197.1|  406|Homo sapiens HS3ST3A1 protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +1

Query: 214 RLVFRMRFAITICRVTVCQMYRLYCYHVECPPIGQ*IVIVSGGEARGGA 360
           R +FR +F + +C + +  +Y  YC    C  +   +V +SGG    GA
Sbjct: 19  RSIFR-KFLLMLCSL-LTSLYVFYCLAERCQTLSGPVVGLSGGGEEAGA 65


>AF105376-1|AAD30208.1|  406|Homo sapiens heparan sulfate
           D-glucosaminyl 3-O-sulfotransferase-3A protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +1

Query: 214 RLVFRMRFAITICRVTVCQMYRLYCYHVECPPIGQ*IVIVSGGEARGGA 360
           R +FR +F + +C + +  +Y  YC    C  +   +V +SGG    GA
Sbjct: 19  RSIFR-KFLLMLCSL-LTSLYVFYCLAERCQTLSGPVVGLSGGGEEAGA 65


>M87869-1|AAA61074.1|   79|Homo sapiens T-cell receptor alpha
           protein.
          Length = 79

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 197 STTNFLYHKNALHLSSLIDSGFCATFVSGPSAVRKNTGMLLRVR 66
           S T+F   K ++H+S   +  FCA  + GP  +R   G  L V+
Sbjct: 33  SQTSFHLRKPSVHISDTAEY-FCAVILLGPHDMRFGAGTRLTVK 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,730,499
Number of Sequences: 237096
Number of extensions: 1078143
Number of successful extensions: 2360
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2360
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)