Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS315H07f
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   1.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   2.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   3.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   3.8  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -2

Query: 242 IANRILKTSRTPVRISTTNFLYHKNALHLSSLIDSGFCATFVSGPSA 102
           +A  +   S  P+ ++ T   +H+N    SSL+ S   ++ VS  SA
Sbjct: 154 LAGNVAPASADPM-VNYTLGHHHQNGATPSSLVSSASASSAVSAASA 199


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 43  RRARVPAARTLNNIPVFFLTADGPETNVAQNPES 144
           R  R P A   NN PV+      P   + + PE+
Sbjct: 115 RLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEA 148


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 217 VVHPLEYLQLIFYITKTLCIFQASLIRGS 131
           + H + YLQ  FY+   +  F  +L  GS
Sbjct: 528 IKHDMVYLQKYFYLFMEMDRFAVTLRPGS 556


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 217 VVHPLEYLQLIFYITKTLCIFQASLIRGS 131
           + H + YLQ  FY+   +  F  +L  GS
Sbjct: 528 IKHDMVYLQKYFYLFMEMDRFAVTLRPGS 556


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,655
Number of Sequences: 438
Number of extensions: 2203
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)