Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS315H05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   2.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.4  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   4.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   4.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   4.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   4.4  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   4.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   4.4  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   7.7  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 174 Y*NYKYSNTNVNFQEQTQYITN 109
           Y NY Y+N N N  ++  Y  N
Sbjct: 101 YNNYNYNNNNYNNYKKLYYNIN 122


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 206 IATFDNRRLMCIKTTNILTPMLIFKS 129
           +AT + R    I + N++TP  +F S
Sbjct: 343 VATLEKRLRDAIDSGNVITPQGVFLS 368


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 168 NYKYSNTNVNFQEQTQYITN 109
           NY YSN N N  +Q  Y  N
Sbjct: 88  NYNYSNYNNNNYKQLCYNIN 107


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 168 NYKYSNTNVNFQEQTQYITN 109
           NY YSN N N  +Q  Y  N
Sbjct: 88  NYNYSNYNNNNYKQLCYNIN 107


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 168 NYKYSNTNVNFQEQTQYITN 109
           NY YSN N N  +Q  Y  N
Sbjct: 88  NYNYSNYNNNNYKQLCYNIN 107


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 168 NYKYSNTNVNFQEQTQYITN 109
           NY YSN N N  +Q  Y  N
Sbjct: 88  NYNYSNYNNNNYKQLCYNIN 107


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 168 NYKYSNTNVNFQEQTQYITN 109
           NY YSN N N  +Q  Y  N
Sbjct: 88  NYNYSNYNNNNYKQLCYNIN 107


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 168 NYKYSNTNVNFQEQTQYITN 109
           NY YSN N N  +Q  Y  N
Sbjct: 88  NYNYSNYNNNNYKQLCYNIN 107


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 240 GDTD*FEYNRLLQRIQFKTCIK 305
           GD+  F    + Q+IQ++ C K
Sbjct: 36  GDSQGFFRRSIQQKIQYRPCTK 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,482
Number of Sequences: 438
Number of extensions: 3037
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)