Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315H02f
(456 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 23 2.1
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 4.8
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 21 4.8
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 4.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 4.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 6.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 6.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 6.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 6.3
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.4
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = +3
Query: 96 RLLKTTMGKISLFFLALIASSVMALYRVPLHRMKTA 203
R+++ +GK+ + + + V++LY P+ + A
Sbjct: 76 RVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAA 111
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 375 SNLWVPSKKCHYTNIAC 425
SN + P CH +IAC
Sbjct: 354 SNGYTPVLDCHTAHIAC 370
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 375 SNLWVPSKKCHYTNIAC 425
SN + P CH +IAC
Sbjct: 65 SNGYTPVLDCHTAHIAC 81
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 375 SNLWVPSKKCHYTNIAC 425
SN + P CH +IAC
Sbjct: 354 SNGYTPVLDCHTAHIAC 370
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 117 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPL 287
GK+++ + S + ++ V L + VG +E+ K DVTG P PL
Sbjct: 289 GKLNVNEFYMAFSKLYSVSVVSLDKSLEVNHISARVGDNVEI---KCDVTGTPPPPL 342
Score = 20.6 bits (41), Expect = 8.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 2 CRIRHEVRS 28
CR RHE+RS
Sbjct: 522 CRPRHEIRS 530
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPP 341
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPP 341
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPP 341
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPP 341
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPP 341
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPP 341
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPP 341
+NY QYY +I+I P
Sbjct: 107 TNYKKLQYYNIINIEQIP 124
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPP 341
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.0 bits (42), Expect = 6.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 391 LPKSATTPTSLVCCTTSTTAS 453
+P + +PT+ TTSTT S
Sbjct: 379 VPTTTASPTTEPSTTTSTTIS 399
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 6.3
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 454 CXLSYLLCSKQAMLV*WHFLEGT 386
C LS +LC M+ W GT
Sbjct: 535 CGLSSMLCIPGYMIYIWFTTSGT 557
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 6.3
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 454 CXLSYLLCSKQAMLV*WHFLEGT 386
C LS +LC M+ W GT
Sbjct: 588 CGLSSMLCIPGYMIYIWFTTSGT 610
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 8.4
Identities = 7/31 (22%), Positives = 17/31 (54%)
Frame = +1
Query: 43 NKSINNNSQFLISKSPSCGF*KQQWERYLYF 135
NK+I+NN+ + + + + + + LY+
Sbjct: 87 NKTIHNNNNYKYNYNNKYNYNNNNYNKKLYY 117
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 8.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 368 GVEYHLERLRRRADTDHSVVL 306
G E+HL+ + + T +SVV+
Sbjct: 1037 GKEHHLQIMNLKTYTQYSVVV 1057
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,395
Number of Sequences: 438
Number of extensions: 3273
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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