Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315G05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 57 4e-08
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 45 2e-04
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 45 2e-04
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 45 2e-04
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 45 2e-04
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 45 2e-04
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 45 2e-04
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 43 6e-04
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 56.8 bits (131), Expect = 4e-08
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -1
Query: 245 MELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTI-RWFAEFQRGRVKLSDD 69
M + +R I + + G + D + +GD AP K+ + +W F++GR + D+
Sbjct: 1 MNSAKIEARTNIKFMVKLGWKNGEITDALRKVYGDNAPKKSAVYKWITRFKKGRDDVEDE 60
Query: 68 PRQGRPKTAVTQENVDAVRKLI 3
R GRP T++ +E ++ VR LI
Sbjct: 61 ARSGRPSTSICEEKINLVRALI 82
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 44.8 bits (101), Expect = 2e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 248 KMELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIR-WFAEFQRGRVKLSD 72
KM L ++ RA+ ++F+ G + + +AFG ++ T++ WF +F +G L D
Sbjct: 330 KMMLDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLED 389
Query: 71 DPRQGRP 51
+ R GRP
Sbjct: 390 EERSGRP 396
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 44.8 bits (101), Expect = 2e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 248 KMELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIR-WFAEFQRGRVKLSD 72
KM L ++ RA+ ++F+ G + + +AFG ++ T++ WF +F +G L D
Sbjct: 3 KMMLDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLED 62
Query: 71 DPRQGRP 51
+ R GRP
Sbjct: 63 EERSGRP 69
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 44.8 bits (101), Expect = 2e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 248 KMELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIR-WFAEFQRGRVKLSD 72
KM L ++ RA+ ++F+ G + + +AFG ++ T++ WF +F +G L D
Sbjct: 88 KMMLDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLED 147
Query: 71 DPRQGRP 51
+ R GRP
Sbjct: 148 EERSGRP 154
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 44.8 bits (101), Expect = 2e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 248 KMELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIR-WFAEFQRGRVKLSD 72
KM L ++ RA+ ++F+ G + + +AFG ++ T++ WF +F +G L D
Sbjct: 330 KMMLDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLED 389
Query: 71 DPRQGRP 51
+ R GRP
Sbjct: 390 EERSGRP 396
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 44.8 bits (101), Expect = 2e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 248 KMELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIR-WFAEFQRGRVKLSD 72
KM L ++ RA+ ++F+ G + + +AFG ++ T++ WF +F +G L D
Sbjct: 330 KMMLDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLED 389
Query: 71 DPRQGRP 51
+ R GRP
Sbjct: 390 EERSGRP 396
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 44.8 bits (101), Expect = 2e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 248 KMELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIR-WFAEFQRGRVKLSD 72
KM L ++ RA+ ++F+ G + + +AFG ++ T++ WF +F +G L D
Sbjct: 330 KMMLDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLED 389
Query: 71 DPRQGRP 51
+ R GRP
Sbjct: 390 EERSGRP 396
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 43.2 bits (97), Expect = 6e-04
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 248 KMELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIR-WFAEFQRGRVKLSD 72
+M L ++ RA+ ++F+ G + + +AFG ++ T++ WF +F +G L D
Sbjct: 2 EMMLDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLED 61
Query: 71 DPRQGRP 51
+ R GRP
Sbjct: 62 EERSGRP 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,818,682
Number of Sequences: 237096
Number of extensions: 1479931
Number of successful extensions: 2514
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2506
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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