Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS315F08f
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    24   1.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.4  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   10.0 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   10.0 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   10.0 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   10.0 

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 289 CIYPILSTKVHNVFASIICSSYAR 218
           CIY + S      F SIIC  + +
Sbjct: 60  CIYALFSKDFRFAFKSIICKCFCK 83


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 289 CIYPILSTKVHNVFASIICSSYAR 218
           CIY + S      F SIIC  + +
Sbjct: 508 CIYALFSKDFRFAFKSIICKCFCK 531


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
 Frame = +2

Query: 41  NQEVEVLKDN--VHNPFQLV------VDYQTNTLFFSYSSLSQGKTVLKSVYLNLNTKEF 196
           NQE E++KDN  ++N  +L+       +Y  + +F  Y   + G    + +      ++ 
Sbjct: 208 NQEYEIMKDNLLLYNHARLMSQDNHSKEYLVSIMFSHYDRNNNGNLEREELEQFAENEDL 267

Query: 197 GEI-SGINSGIATAYD 241
            E+  G N G   +YD
Sbjct: 268 EELCRGCNLGHMISYD 283


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 401 EKAFVYSYGQVGPVPELTDIKT 466
           E AF Y YG   P    T+ +T
Sbjct: 216 EIAFAYRYGDAIPTVPYTETET 237


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 95  VDYQTNTLFFSYSSLSQGKTVLKSVYLNL 181
           V +QT T+   Y  L + KT+L  V L L
Sbjct: 131 VTFQTMTIPNHYLWLYKDKTILYMVKLTL 159


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 286 IYPILSTKVHNVFASIIC 233
           +Y ++S K  N F   IC
Sbjct: 327 LYNLMSIKYRNAFKQTIC 344


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 218 SGIATAYDRSKHVVYLGGQDGIYTFD 295
           SGI   +DR    VY+   D    FD
Sbjct: 6   SGILYLFDRPSEPVYVPKGDNKVAFD 31


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 125 SYSSLSQGKTVLKSVYLNLNTKEFGEISGINS 220
           S +SLS  +  LK   LNL T      S I+S
Sbjct: 349 SDNSLSSSEEKLKQDILNLRTDISSSSSSISS 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,876
Number of Sequences: 438
Number of extensions: 3145
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)