Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS315F07f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0138 - 1069616-1069894,1070056-1070607,1070689-1071046,107...    28   5.2  
11_01_0137 - 1137979-1138257,1138419-1138970,1139052-1139409,113...    27   6.9  
06_03_1357 + 29543922-29545058,29545632-29545784,29545904-29546050     27   6.9  
12_01_0285 + 2120130-2121204,2122842-2123116                           27   9.1  
11_04_0443 - 17808897-17809110,17809169-17813652                       27   9.1  
11_01_0281 + 2086674-2087652,2089200-2089483                           27   9.1  
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665...    27   9.1  

>12_01_0138 -
           1069616-1069894,1070056-1070607,1070689-1071046,
           1071214-1071503,1072257-1072360,1072419-1072575,
           1073229-1073273,1073636-1073692
          Length = 613

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 8/29 (27%), Positives = 20/29 (68%)
 Frame = +2

Query: 104 PRSCQMEYSLRCIT*VGFYLILREHAIQR 190
           P+SC++EY + C+  V +  ++++  ++R
Sbjct: 139 PKSCELEYGIYCLWSVEYKEVMKDFIVKR 167


>11_01_0137 -
           1137979-1138257,1138419-1138970,1139052-1139409,
           1139577-1139869,1140623-1140675,1140785-1140941,
           1141666-1141683,1141846-1141929,1142005-1142064,
           1142182-1142222,1142316-1142451
          Length = 676

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 104 PRSCQMEYSLRCIT*VGFYLILREHAIQR 190
           PRSC++EY   C+  V +  ++++  ++R
Sbjct: 202 PRSCELEYGSYCLWSVEYKEVMKDFIVKR 230


>06_03_1357 + 29543922-29545058,29545632-29545784,29545904-29546050
          Length = 478

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = +1

Query: 430 GSGLALPLVLLTSMSDGNRLPSGGPYARL 516
           GS LA  L LL  M      PSG  YARL
Sbjct: 64  GSDLASSLRLLADMQAAGLRPSGAAYARL 92


>12_01_0285 + 2120130-2121204,2122842-2123116
          Length = 449

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 384 AWEFSVLKSNLKNFGRQRLGSAPGIADVH 470
           AW F V   +L + G  RLG A   AD+H
Sbjct: 212 AWYFEVKVLHLGSTGHTRLGWATNNADIH 240


>11_04_0443 - 17808897-17809110,17809169-17813652
          Length = 1565

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 518 CRRAYGPPDG-KRLPSLMDVSNTRGRAKPLPT 426
           C   Y  P+  +  PSL D+    G +KPLPT
Sbjct: 47  CNIGYIVPEWVESKPSLSDIQELHGSSKPLPT 78


>11_01_0281 + 2086674-2087652,2089200-2089483
          Length = 420

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 384 AWEFSVLKSNLKNFGRQRLGSAPGIADVH 470
           AW F V   +L + G  RLG A   AD+H
Sbjct: 215 AWYFEVKVLHLGSTGHTRLGWATNNADIH 243


>09_04_0727 +
           19765175-19765384,19765523-19765595,19766476-19766570,
           19766666-19768450,19768533-19768721,19768816-19768958,
           19769075-19769320,19769975-19770059,19770117-19770191,
           19770304-19770369,19770466-19770712,19770824-19771242
          Length = 1210

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +3

Query: 39  IKTSNKEQIHNTLVNVNLALI 101
           +++S +EQIHN++V+  LAL+
Sbjct: 498 VRSSKQEQIHNSIVSTLLALM 518


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,165,305
Number of Sequences: 37544
Number of extensions: 248275
Number of successful extensions: 454
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)