Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315F03f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 133 2e-32
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 122 2e-29
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 121 6e-29
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 113 2e-26
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 99 2e-22
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 93 3e-20
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 79 4e-16
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 49 4e-07
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 40 2e-04
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 30 0.24
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.2
SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces pomb... 26 3.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.2
SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|ch... 25 5.2
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 6.8
SPCC757.03c |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 25 6.8
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 133 bits (321), Expect = 2e-32
Identities = 65/104 (62%), Positives = 73/104 (70%)
Frame = -1
Query: 521 VIKNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 342
VI NFMIQ G+SIYG RF DENFKL H G LSMANAG D+NGSQFFIT
Sbjct: 79 VIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFIT 138
Query: 341 TVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 210
TVKTPWLDG HVVFG+VL G D+V+KI T D+P++DV I
Sbjct: 139 TVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKI 182
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 122 bits (295), Expect = 2e-29
Identities = 70/126 (55%), Positives = 82/126 (65%), Gaps = 4/126 (3%)
Frame = -1
Query: 521 VIKNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 342
VIKNFM+Q G SIYGE+FEDENF+LKH LSMANAG +TNGSQFFIT
Sbjct: 59 VIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFIT 118
Query: 341 TVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD----TKTEVVAEPF 174
TV TP LDG+HVVFGKV++G V+ IE T ND PV VVI + TK ++ A
Sbjct: 119 TVPTPHLDGKHVVFGKVIQGKSTVRTIENLET-KNDDPVVPVVIEECGTCTKDQIEAPKP 177
Query: 173 SVTKES 156
VT +S
Sbjct: 178 DVTGDS 183
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 121 bits (292), Expect = 6e-29
Identities = 61/106 (57%), Positives = 73/106 (68%)
Frame = -1
Query: 521 VIKNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 342
VI FM+Q G+SIYGE+F DENF LKH G LSMANAG +TNGSQFFIT
Sbjct: 54 VIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFIT 113
Query: 341 TVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 204
TV TPWLDG+HVVFG+V EGMDVV+K+E G+N + ++ D
Sbjct: 114 TVVTPWLDGKHVVFGEVTEGMDVVKKVES--LGSNSGATRARIVID 157
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 113 bits (272), Expect = 2e-26
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Frame = -1
Query: 521 VIKNFMIQXXXXXXXXXXXGRSIYGER-FEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 345
+I+ FMIQ +I+ R F DENF LKH G LSMANAGKD+NG QFFI
Sbjct: 63 IIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFI 122
Query: 344 TTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 210
TTV +LDG+HVVFG+V+EG D+V++IE T GAN RP +V I
Sbjct: 123 TTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAI 167
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 99 bits (238), Expect = 2e-22
Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Frame = -1
Query: 521 VIKNFMIQXXXXXXXXXXXGRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFI 345
VI +F+IQ SIYG++F+DE + L H GAG LSMANAG +TN SQFFI
Sbjct: 46 VIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFI 104
Query: 344 TTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 210
T TPWLDG+H +FG+V+ G+ V +++ + T ++DRP++ + I
Sbjct: 105 TLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 92.7 bits (220), Expect = 3e-20
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = -1
Query: 521 VIKNFMIQXXXXXXXXXXXGRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFI 345
+IKNFMIQ SI+ + FEDE + LKH +SMAN+G +TNGSQFFI
Sbjct: 499 IIKNFMIQGGDPLGDGTGG-ESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFI 557
Query: 344 TTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 210
TT TPWLDG+H +F + G+DVV +IE T DRP++ I
Sbjct: 558 TTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDKYDRPLEPTKI 602
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 79.0 bits (186), Expect = 4e-16
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = -1
Query: 518 IKNFMIQXXXXXXXXXXXGRSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFIT 342
I FMIQ +SI+G+ F+DE LKH G +SMAN GK+TNGSQFFI
Sbjct: 321 IARFMIQGGDPSGTGRGG-QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFIL 379
Query: 341 TVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPFSVTK 162
LD +H +FG+V+ G++V+ +E T +ND P + + D + +PF K
Sbjct: 380 YGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLED--IIIFVDPFEEWK 437
Query: 161 E 159
+
Sbjct: 438 K 438
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 49.2 bits (112), Expect = 4e-07
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = -1
Query: 521 VIKNFMIQXXXXXXXXXXXGRSIYGERFEDENF-KLKHYGAGWLSMANAGKDTNGSQFFI 345
V+ F+IQ SIYGE F E +L+ G + MA + N SQFFI
Sbjct: 57 VVPEFLIQGGDPTGTGMGG-ESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFI 115
Query: 344 TTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPFSV 168
T TP +G+ +FG+V+ + + V +I AN RPV I TEV+ F+
Sbjct: 116 TLGPTPEWNGKQTLFGRVVGDTIYNVVRISELELDANQRPVFPPKI--ISTEVIDNYFTD 173
Query: 167 TK 162
K
Sbjct: 174 IK 175
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 40.3 bits (90), Expect = 2e-04
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Frame = -1
Query: 449 GERFEDENFK--LKHYGAGWLSMANA---GKDTN----GSQFFIT-TVKTPWLDGRHVVF 300
G RF F L H G +SM+ A +D GSQF IT + LD R+ ++
Sbjct: 74 GTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIY 133
Query: 299 GKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPF 174
G+V EG D + KI + +P +D+ I T ++ +PF
Sbjct: 134 GQVAEGFDTLLKINDAICDEEGQPYRDIRIK--HTIILDDPF 173
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.9 bits (64), Expect = 0.24
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 169 TLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKTT 309
+L TT+V+V+++ T G PVT SIF T + + T +T+
Sbjct: 460 SLHYKTTTTVWVTEVFTRYLGDDSTPVTSSSIFSTATEATDTSVQTS 506
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +1
Query: 181 SATTSVFVSDITTSLTGRSFAPVTVISIFCT--TSIP---SKTLPKTTCLP 318
+++TS+ + +TS T + +P+ S CT TSIP + T P T +P
Sbjct: 256 TSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVP 306
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 181 SATTSVFVSDITTSLTGRSFAPVTVISIFCTTS 279
+++TS+ + +TS T + +P+ S CTTS
Sbjct: 200 TSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTS 232
>SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 710
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = -1
Query: 323 LDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPFSVTKESAH*I 144
L G H + G+ L +D + I TV + ++ SDT T++ T ++ +
Sbjct: 109 LSGSHTLTGEALSILDSIPSIAYTVPDLDAVVTINIYESDTNTQLAC--VRTTVQNGRSV 166
Query: 143 YNKCL 129
Y++ +
Sbjct: 167 YHRAV 171
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 163 FVTLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKT 294
+ T S+ S+F T S T +PV+ S T+ +PS T
Sbjct: 75 YATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSST 118
>SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 154 LTKFIINVLMINIFMRMHLLDFYVIFIYHY 65
L FII L I + + + LL+F + FI Y
Sbjct: 211 LITFIIGFLPITVLVAISLLEFGIAFIQAY 240
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -1
Query: 317 GRHVVFGKVLE-GMDVVQKIEMTVTGANDRPVKDVV 213
GR +V V+E G+D+VQ+ + A ++ V+DV+
Sbjct: 929 GRSMVEKLVVEYGLDIVQRSMYGIQAAAEKAVRDVL 964
>SPCC757.03c |||ThiJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 350 FITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA-NDRPVKDV 216
F+ K+P +GR VV+GK + + ++ M V+ A +R ++D+
Sbjct: 147 FVDDTKSP--EGRSVVYGKKVTAFNSTGELVMGVSSALRERNMQDL 190
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,051,386
Number of Sequences: 5004
Number of extensions: 39586
Number of successful extensions: 119
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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