Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315E01f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 27 1.3
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 27 1.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 1.7
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 27 1.7
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 27 2.2
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 26 3.0
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 26 3.9
SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces ... 25 5.2
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 5.2
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 25 5.2
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 25 6.8
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 25 6.8
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 6.8
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 25 9.0
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 25 9.0
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 27.5 bits (58), Expect = 1.3
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Frame = +2
Query: 161 SKSRSVDHGFSPPFDLESLRSKVEGRFDAVHRDEDDQAKRLPPPPPIKTMTY-TVRDRDT 337
S +R HG P + RS F VH + L + M + + D +
Sbjct: 84 SHTRWATHGIPSPINCHPQRSDPHSEFIVVHNGILTNYRELRTVLESRGMVFESETDTEC 143
Query: 338 LTSLAA-RFDTTPS-ELTKLNRLATQFIFPGQTLLVPDKRKDGD 463
+ LA +DTTP + T L +L + + LL+ G+
Sbjct: 144 VAKLAKFIYDTTPGVDFTSLAKLVFRELEGAYALLIKSSHYPGE 187
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 221 SKVEGRFDAVHRDEDDQAKRLPPPPPIKTMTYTVRDRDTLTSLAARFDTTPSELTKLNRL 400
S++E R+ V RDEDD K IK + + + S+ ++ + T + L++ ++
Sbjct: 97 SELEPRYTRVFRDEDDDQKHQLDSEAIKLLDIADHGNEEI-SMDSQLEITGNILSETEKM 155
Query: 401 A 403
A
Sbjct: 156 A 156
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 152 KNRSKSRSVDHGFS--PPFDLESLRSKVEGRFDAVHRDEDDQAKRLPPPP 295
K ++ +S DHG S D E + K + R HR+ +++ + PP P
Sbjct: 714 KKDTQKQSHDHGHSHSKSHDREKEKEKKKDREHRKHRETEEEDEGPPPQP 763
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 62 NDTDDESETPTYVRQKRLSWWNVFVPDNM 148
N +SE P Y R L W+VF+ +N+
Sbjct: 156 NAVGSDSEKPMYFRFLTLMAWHVFISENV 184
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 245 AVHRDEDDQAKRLPPPPPIKTM 310
A+ D+D+ AK LP PP + T+
Sbjct: 366 AIEGDDDEVAKVLPKPPSVPTI 387
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 26.2 bits (55), Expect = 3.0
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 167 SRSVDHGFSPPFDLESLRSKVEGRFDAVHRDEDDQAKRLPPPPPIKTMTYTVRDRDT 337
S S+ GF P L L +K + H +DD++K+L P P + Y DT
Sbjct: 307 STSIIRGFDPR--LPVLSTKNVSHEEKSHSVQDDKSKQLLKPNPTQPYFYLRGSFDT 361
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 272 AKRLPPPPPIKTMTYTVRDRDTLT 343
A R PPPPP T T ++R ++TLT
Sbjct: 539 AHRDPPPPP--TETSSLRRKNTLT 560
>SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 209 ESLRSKVEGRFDAVHRDEDDQAKRLPPPPPI 301
E L +++ + D Q LPPPPP+
Sbjct: 296 EKLSRELDHKTKDASSTNDSQTTPLPPPPPV 326
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 269 QAKRLPPPPPIKTMTYTVRDRDTLTSLA 352
Q R PPPPP+ Y V + T+ +++
Sbjct: 352 QGSRPPPPPPMPAPIYNVPNVPTVPTVS 379
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 384 VSSDGVVSNLAASDVSVSLSRTVY 313
VSS G+ +NLAA VS+ S T +
Sbjct: 54 VSSPGIFANLAAKPVSLPASTTQF 77
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +2
Query: 131 FVPDNMLKNRSKSRSVDHGFSPPFDLESLRSKVEGRFDAVHRDEDDQAKRLPPPPPIKTM 310
F N + N S D GF+PPF+ E+ S + R + + P P I
Sbjct: 454 FAVSNYIDNMDLDSS-DCGFNPPFEPENTFSMIPHRLQQAISYYANSPEGDLPQPNIYLT 512
Query: 311 TYT 319
YT
Sbjct: 513 RYT 515
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.0 bits (52), Expect = 6.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 166 KSFSRSWILPAFRLGISA 219
KS + SW+LP F +G+ +
Sbjct: 2204 KSLTHSWLLPVFGVGLGS 2221
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 2 PRSWAARLQLERKKRRKSGGNDTDDESETPTYVRQKRLSWWNVFVPDNML 151
PRS KKR ND +DE+ + +K+ + V N+L
Sbjct: 502 PRSTIDSFSNISKKRNSEEANDENDETNLKIPIPEKKRKFQEVLQSKNIL 551
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 173 SVDHGFSPPFDLESLRSKVEGRF 241
+ +H FS P D LR K+ G F
Sbjct: 825 NANHEFSDPTDYTFLREKLSGHF 847
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 443 DKRKDGDKESDGPSESGDNTSES 511
+ D + SD SESGD+ S S
Sbjct: 203 ESSSDSESSSDSSSESGDSDSSS 225
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,199,695
Number of Sequences: 5004
Number of extensions: 43735
Number of successful extensions: 167
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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