Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS315D02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    25   0.36 
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    25   0.36 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   3.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   4.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   5.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   5.8  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   7.7  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   7.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.7  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 485 WSEVEKYQCVNRTMLKMHFFMLRYWFTGGRTSYESAR 375
           WS V  + C   +ML +  +M+  WFT   T  E  R
Sbjct: 527 WSHVLGWLCGLSSMLCIPGYMIYIWFTTSGTISEKFR 563


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 485 WSEVEKYQCVNRTMLKMHFFMLRYWFTGGRTSYESAR 375
           WS V  + C   +ML +  +M+  WFT   T  E  R
Sbjct: 580 WSHVLGWLCGLSSMLCIPGYMIYIWFTTSGTISEKFR 616


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 467 YQCVNRTMLKMH 432
           Y CVN++ML  H
Sbjct: 24  YSCVNKSMLNSH 35


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 143 GEILRISSWECAALEAGLGTVFSPELSATLSWLL 42
           G +  +S+W+   LEAG       E+ + L   L
Sbjct: 85  GRLSEVSNWKVLLLEAGPDEPAGAEIPSNLQLYL 118


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 110 AALEAGLGTVFSPELSATLS 51
           +A +AG+GT+F   LS  +S
Sbjct: 302 SAQQAGVGTIFDRVLSELVS 321


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 110 AALEAGLGTVFSPELSATLS 51
           +A +AG+GT+F   LS  +S
Sbjct: 302 SAQQAGVGTIFDRVLSELVS 321


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 426 KKMHL*HGSVYTLIFFYFAPSD 491
           K  H     V TLIF YF  +D
Sbjct: 3   KNYHFFFILVITLIFLYFGEAD 24


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 53  SWLLKIWTNSYL 18
           SW+  +WT+S+L
Sbjct: 93  SWMTLMWTDSHL 104


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 251 NAPPILRYKFL 283
           NAPP+L Y F+
Sbjct: 419 NAPPMLLYSFI 429


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 251 NAPPILRYKFL 283
           NAPP+L Y F+
Sbjct: 419 NAPPMLLYSFI 429


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,061
Number of Sequences: 438
Number of extensions: 4045
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)