Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315C05f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 46 5e-06
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 40 2e-04
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 39 5e-04
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 35 0.006
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 35 0.006
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 34 0.011
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 34 0.015
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 33 0.020
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 33 0.026
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 33 0.026
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 33 0.026
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 32 0.045
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 31 0.10
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 31 0.14
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 30 0.18
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 30 0.18
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 30 0.18
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 30 0.24
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 29 0.32
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 29 0.32
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 29 0.32
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 29 0.32
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 0.56
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 28 0.73
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 28 0.73
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 28 0.73
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 28 0.73
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 28 0.73
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 28 0.73
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 28 0.97
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 28 0.97
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 28 0.97
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 27 1.3
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 27 1.3
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 27 1.3
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 27 1.7
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 27 1.7
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 27 2.2
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 26 3.0
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 26 3.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 5.2
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 25 6.8
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 25 6.8
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 6.8
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 25 6.8
SPCC1020.09 |||WD repeat protein, human WDR79 family|Schizosacch... 25 9.0
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 25 9.0
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 25 9.0
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 25 9.0
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 45.6 bits (103), Expect = 5e-06
Identities = 28/100 (28%), Positives = 44/100 (44%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHR 228
L GH V+++ WSPD RYL++ + LW +L K H S++ W
Sbjct: 251 LIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDYK--HG--FSVSCCCWLP 306
Query: 229 AGDKFVCGGARGQFYHCALDGTLLSSWDGVRVNALCCRED 348
G F+ G H +L+G +L W+ V + + D
Sbjct: 307 DGLSFITGSPDCHITHWSLNGEILYKWEDVNIYDMALTSD 346
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 40.3 bits (90), Expect = 2e-04
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 19 EAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQE 198
+ K F +L GH V AWS D R L+++ + L +W++ ++ + + E
Sbjct: 417 DGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQD--TTLKVWDVRSKKMKFDLP-GHE 473
Query: 199 DSLTAAAWHRAGDKFVCGGA 258
D + A W G + GGA
Sbjct: 474 DQVFAVDWSPDGQRVASGGA 493
Score = 31.5 bits (68), Expect = 0.079
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
+WD +K++ F L GH V + WSPDG+ + + G + +W
Sbjct: 457 VWDV--RSKKMKF--DLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 29.9 bits (64), Expect = 0.24
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPED 129
+WD D + + ++GHT VS +AW+PD +IA G D
Sbjct: 161 LWDCDTQTPIAT----MKGHTNWVSCVAWAPDAS-IIATGSMD 198
Score = 27.9 bits (59), Expect = 0.97
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
+WD K ++ + GH V+ ++SPDGR + A + LW
Sbjct: 372 LWDPQKSTKPIT---KMHGHQKVVNHASFSPDGRCIATASFDSSVRLW 416
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 38.7 bits (86), Expect = 5e-04
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +1
Query: 46 SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNM----ETELLHLKMTHSQEDSLTA 213
+LEGH V +AWS +G YL + +WIW E + L + H+Q+ +
Sbjct: 373 ALEGHENEVKCIAWSCNGNYLATCSRD--KSVWIWEATEDDEFDCLAVLQEHTQD--VKV 428
Query: 214 AAWHRAGDKFVCG 252
WH D V G
Sbjct: 429 VTWHPTEDLLVSG 441
Score = 29.1 bits (62), Expect = 0.42
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWI 147
L+GHT V LA+SP+G L +A + LWI
Sbjct: 463 LQGHTNTVWALAFSPNGNTLASADNDGNVFLWI 495
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 35.1 bits (77), Expect = 0.006
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 61 TYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRAGDK 240
TY VS LA+S DG +L A + IWN +T+ + ++ AW
Sbjct: 201 TYEVSSLAYSSDGGFLAIARVNGFVE--IWNRKTKNNRCDYKFHHDGDISCMAWSPINWT 258
Query: 241 FVCGGARGQFY 273
+ GG+ G Y
Sbjct: 259 LLVGGSTGNIY 269
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 35.1 bits (77), Expect = 0.006
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLK 180
+WD + R F GH + L +S +GR++++ + L W++ET LK
Sbjct: 386 LWDLSTQKVRYVF----SGHEQDIYSLDFSHNGRFIVSGSGDRTARL--WDVETGQCILK 439
Query: 181 MTHSQEDSLTAAAWHRAGDKFVCGGARGQFYHC-ALDGTLLSSWDGVR--VNALCCREDA 351
+ E+ +TA A D+F+ G+ Q ++ GTL+ +G + V ++ D+
Sbjct: 440 L--EIENGVTAIA-ISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDS 496
Query: 352 RSVLAADTHHRVRLYD 399
+L+ +++++
Sbjct: 497 SILLSGSLDKTIKVWE 512
Score = 32.3 bits (70), Expect = 0.045
Identities = 27/153 (17%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Frame = +1
Query: 70 VSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRAGDKFVC 249
V +A+SPDG+YL+ G ED + +W++ T+ + + ++D + H +F+
Sbjct: 363 VRTIAFSPDGKYLV-TGTED-RQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNG--RFIV 418
Query: 250 GGA---RGQFYHCALDGTLLSSWDGVRVNALCCREDARSVLAADTHHRVRLYDFTDLTDR 420
G+ + + +L V A+ + + + +R++ +
Sbjct: 419 SGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVE 478
Query: 421 NLIQEEHAVMAMTVNAADSLLLLNVXNQGVHLW 519
L + +V ++ + S+LL ++ + +W
Sbjct: 479 RLEGHKESVYSIAFSPDSSILLSGSLDKTIKVW 511
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 55 GHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRAG 234
GHT V +A SPD R+ + +G +D + W+++T +L ++S+ + + G
Sbjct: 536 GHTDFVLSVAVSPDSRWGL-SGSKD-RSMQFWDLQTGQSYL-TCQGHKNSVISVCFSPDG 592
Query: 235 DKFVCG 252
+F G
Sbjct: 593 RQFASG 598
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 34.3 bits (75), Expect = 0.011
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +1
Query: 70 VSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRAGDKFVC 249
V+FL P G YL+AA E C +I+++++++ ++ + +T+ A H G+ FV
Sbjct: 298 VNFLQAHPSGEYLLAASNEKC---YIFSLKSQVYNITVA----QHITSLAVHPDGNLFVA 350
Query: 250 GGARGQ 267
G G+
Sbjct: 351 GLENGE 356
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 33.9 bits (74), Expect = 0.015
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 46 SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
S+ GHT V +AW P+G++ ++AG + L+
Sbjct: 365 SISGHTKSVKGVAWDPEGKFYLSAGTDQTTRLF 397
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 19 EAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAG 120
E + + ++ L+GH+ V+ + +SPD RY+++AG
Sbjct: 564 ETQSWNQQQVLKGHSLTVTTIKFSPDDRYILSAG 597
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 33.5 bits (73), Expect = 0.020
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 64 YG-VSFLAWSPDGRYLIAAGPEDCPDLWIWNMET 162
YG V+ LAW+ D RYL + G +D + +WNME+
Sbjct: 246 YGTVNGLAWTSDARYLASCGTDD--RIRVWNMES 277
Score = 30.3 bits (65), Expect = 0.18
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 34 SFRKSLEGHTYGVSFLAWSPDGRYLIAAGPED 129
S+ SL GHT V + W P +++A+G D
Sbjct: 180 SYTHSLSGHTGNVLAVDWCPKNEFVLASGSAD 211
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 33.1 bits (72), Expect = 0.026
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 31 LSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETE 165
+ +K L GHT V+ L WS DG +L+ +G +D L +W++ E
Sbjct: 35 IDLQKELTGHTGCVNTLDWSADGEFLL-SGSDD-TRLIVWDVFNE 77
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 33.1 bits (72), Expect = 0.026
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLK 180
+WD + S R S GHT VS + SPDG + G + LW N T L L+
Sbjct: 176 VWDLET----FSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLE 231
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 40 RKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMET-ELLHLKMTHSQE 198
++ L GH++ VS A S D Y ++A + + +W++E E H + H+ +
Sbjct: 56 QRRLTGHSHFVSDCALSFDSHYALSASWD--KTIRLWDLEKGECTHQFVGHTSD 107
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.1 bits (72), Expect = 0.026
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 6/162 (3%)
Frame = +1
Query: 52 EGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRA 231
EG Y V +A+SPDG+YL A G ED + IW++ + ++ +T E + + + +
Sbjct: 332 EGDLY-VRSVAFSPDGKYL-ATGVED-QQIRIWDIAQKRVYRLLT-GHEQEIYSLDFSKD 387
Query: 232 GDKFVCGGARGQFYHCALD------GTLLSSWDGVRVNALCCREDARSVLAADTHHRVRL 393
G V G G C D +L + DG V + D + + A +R+
Sbjct: 388 GKTLVSGS--GDRTVCLWDVEAGEQKLILHTDDG--VTTVMFSPDGQFIAAGSLDKVIRI 443
Query: 394 YDFTDLTDRNLIQEEHAVMAMTVNAADSLLLLNVXNQGVHLW 519
+ + L E +V ++ + L+ + + LW
Sbjct: 444 WTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 485
Score = 33.1 bits (72), Expect = 0.026
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 43 KSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
+ L GH V +A+SPDG+YL++ ++ LW
Sbjct: 452 EQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 485
Score = 27.9 bits (59), Expect = 0.97
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLK 180
IWD A++ +R L GH + L +S DG+ L++ + LW + E K
Sbjct: 360 IWDI---AQKRVYRL-LTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLW----DVEAGEQK 411
Query: 181 MTHSQEDSLTAAAWHRAGDKFVCGGARGQFYHC-ALDGTLLSSWDG--VRVNALCCREDA 351
+ +D +T + G +F+ G+ + GTL+ G V ++ D
Sbjct: 412 LILHTDDGVTTVMFSPDG-QFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDG 470
Query: 352 RSVLAADTHHRVRLYD 399
+ +++ + ++L++
Sbjct: 471 KYLVSGSLDNTIKLWE 486
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 32.3 bits (70), Expect = 0.045
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQED-SLTAAAWH 225
L GH + +A++P G L++A E + IW+++T + T S+ D ++ A AW+
Sbjct: 225 LRGHAAWIFAVAFNPVGDLLLSADVEG--KIKIWDIDT--MECISTQSETDGAIWAVAWY 280
Query: 226 RAGDKFVCGGA 258
+ G F+ GA
Sbjct: 281 KNG--FIVAGA 289
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAG 120
L GHT V +A+SP L AAG
Sbjct: 183 LSGHTSPVRSVAFSPGSTLLAAAG 206
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 31.1 bits (67), Expect = 0.10
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 IWDF--DPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWI 147
IW + ++ + +L HT V+ + ++P+G L AG E LW+
Sbjct: 45 IWQLITSESSTKVEYLSTLSRHTQAVNVVRFNPEGNILATAGDEGTIMLWV 95
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 30.7 bits (66), Expect = 0.14
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQ 195
LEGH V +A+ P G YL++A + LW + ELL ++ HS+
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELL-MQEGHSE 308
Score = 28.3 bits (60), Expect = 0.73
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHS 192
L+ H + +AWSP+G L + +D +W + L H HS
Sbjct: 345 LDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLR-KVSLAHTIPAHS 391
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 52 EGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRA 231
EGH+ G+ +A PDG + + G + +W ++ L H ++ + A AW
Sbjct: 304 EGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLD-EHIRQ--IVAMAWSPN 360
Query: 232 GDKFVCGGA 258
G + A
Sbjct: 361 GYQLATSSA 369
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 30.3 bits (65), Expect = 0.18
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
+W++ P R+ +L+GHT V +LA SP+G ++ ++ W
Sbjct: 488 LWNY-PSVSRVG---TLKGHTDRVLYLAMSPNGENIVTGAADETLRFW 531
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 30.3 bits (65), Expect = 0.18
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 58 HTY--GVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRA 231
H+Y G++ + WSPDG+++ G +D ++ + + + + S + AW
Sbjct: 361 HSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYSFPLRKLVARCQGHKSWVTDVIFDAWRCD 420
Query: 232 GDKF 243
D +
Sbjct: 421 DDNY 424
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.3 bits (65), Expect = 0.18
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 46 SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
+L+GH+ V LAW DG L + G ++ +W
Sbjct: 299 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIW 331
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.24
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMET 162
L H ++ L+W+ +G YL++ G E L +W MET
Sbjct: 258 LHWHANPLNGLSWALNGEYLLSGGQEGV--LVLWQMET 293
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 29.5 bits (63), Expect = 0.32
Identities = 20/88 (22%), Positives = 37/88 (42%)
Frame = +1
Query: 55 GHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRAG 234
GHT V + P G Y + G + + +WN+ ++ + + + + ++T W R
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMD--RQILLWNVFGDVKNYGVLNGCKGAITDLQWSR-- 103
Query: 235 DKFVCGGARGQFYHCALDGTLLSSWDGV 318
+ +C+ T L SWD V
Sbjct: 104 --------DSRVVYCSSSDTHLMSWDAV 123
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 29.5 bits (63), Expect = 0.32
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNME 159
+WD +RL +LEGH V L WSP ++A+ D + IW++E
Sbjct: 308 LWDLRNPYQRLH---TLEGHEDEVYGLEWSPHDEPILASSSTD-RRVCIWDLE 356
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETE 165
L+GHT L W+P+ +A G ED + +W+++T+
Sbjct: 178 LKGHTAEGFGLCWNPNLPGNLATGAED-QVICLWDVQTQ 215
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 55 GHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWN 153
GHT +S +W P+ R+++ + +D L IW+
Sbjct: 380 GHTNRISEFSWCPNERWVVGSLADD-NILQIWS 411
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 29.5 bits (63), Expect = 0.32
Identities = 23/104 (22%), Positives = 42/104 (40%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLK 180
+WD + F EGH+ + L + P G +L++ + +W + + +
Sbjct: 173 LWDLNSSRSMAVF----EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIP 228
Query: 181 MTHSQEDSLTAAAWHRAGDKFVCGGARGQFYHCALDGTLLSSWD 312
+ HS E A W V G + + A +G L+ +WD
Sbjct: 229 VFHSVE----AIGW-------VNGQPEEKILYTAGEGNLILAWD 261
Score = 27.9 bits (59), Expect = 0.97
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETEL---LHLKMTHSQEDSLTAAA 219
LEGHT V L S DG +L ++ LW N+E + +H+ H+ S+TA A
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTA--SVTAVA 417
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 29.5 bits (63), Expect = 0.32
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 28 RLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSL 207
RL F++ L HT V + + P ++IA+ + IWN T+ L ++ + +
Sbjct: 3 RLDFQRKLLSHTERVKAVDFHPTEPWVIASHYNG--QVGIWNYNTQTL-VRSFDINDVPI 59
Query: 208 TAAAWHRAGDKFVCG 252
A A+ + FVCG
Sbjct: 60 RACAFIARKNWFVCG 74
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 28.7 bits (61), Expect = 0.56
Identities = 19/79 (24%), Positives = 29/79 (36%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHR 228
L GH + + WS DG Y+ G + LW + E + D + +WH
Sbjct: 100 LTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFI---TAFETVDEIVWLSWHP 156
Query: 229 AGDKFVCGGARGQFYHCAL 285
G G G + +L
Sbjct: 157 KGLFLAAGCNDGSIWMWSL 175
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 0.73
Identities = 28/159 (17%), Positives = 66/159 (41%), Gaps = 4/159 (2%)
Frame = +1
Query: 55 GHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRAG 234
GH + + +SP G Y A + L W++E L++ ++ + ++H
Sbjct: 443 GHNAPIWDVQFSPFGYYFATASHDQTARL--WDVE-HAAPLRVFVGHQNDVDCVSFHPNA 499
Query: 235 DKFVCGGA--RGQFYHCALDGTL-LSSWDGVRVNALCCREDARSVLAADTHHRVRLYDFT 405
G + + + GT+ + + V+ALC D S+ +AD ++++D
Sbjct: 500 AYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLR 559
Query: 406 DLTDR-NLIQEEHAVMAMTVNAADSLLLLNVXNQGVHLW 519
+ ++ V +++ + + +L+ + V+ W
Sbjct: 560 SSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFW 598
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 28.3 bits (60), Expect = 0.73
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 67 GVSFLAWSPDGRYLIAAGPEDCPDLW 144
G+S L++S DG YL++ G ++ +W
Sbjct: 300 GISCLSFSQDGNYLLSRGEDNALRVW 325
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 28.3 bits (60), Expect = 0.73
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 34 SFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTA 213
S+R+ L GH + L WS D + +++ G + + +WN T LK + + +
Sbjct: 126 SYRRLL-GHDNDIQDLCWSYDSQLVVSVGLDS--SIIVWN-GTTFERLKRIEAHQSHVKG 181
Query: 214 AAWHRAGDKF 243
+ AG F
Sbjct: 182 ITFDPAGKYF 191
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 58 HTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLT 210
HT V+ + +SP+G+YL A+G +D + IW+ E + L T + T
Sbjct: 73 HTGTVTSVRFSPNGQYL-ASGSDDRVVI-IWHKEEAIPGLGSTFGSGEKHT 121
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 28.3 bits (60), Expect = 0.73
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 46 SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLK 180
S G YG +F SPD +YL++ + LW + +T L+ K
Sbjct: 377 SHSGPVYGTTF---SPDNKYLLSCSEDASARLWSVDTKTALVAYK 418
Score = 27.9 bits (59), Expect = 0.97
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 55 GHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRAG 234
GHT V+ +A +PDG + +A E + +W++ T +K ++ + ++ R
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGL--IHLWDIGTG-RRIKTMRGHRGNIYSLSFSRES 559
Query: 235 DKFVCGGA 258
V GG+
Sbjct: 560 TVLVSGGS 567
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
+W D + ++++ GHT V +A+ P G Y A + LW
Sbjct: 405 LWSVDTKTALVAYK----GHTGPVWDVAFGPFGHYFATASHDQTAQLW 448
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 0.73
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 46 SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
SL GH +S LA + DG L ++C LW
Sbjct: 269 SLTGHENRISSLALTSDGTMLATGSWDECVRLW 301
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 28.3 bits (60), Expect = 0.73
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +1
Query: 52 EGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRA 231
+ H Y V WS DGR+LI+ + E L ++K+ + E + A+
Sbjct: 120 QSHDYAVRCAEWSTDGRWLISGDGGG----MVKYFEPNLNNVKIVQAHEMEVRDVAFSPN 175
Query: 232 GDKFVCGGARG 264
KFV G
Sbjct: 176 DSKFVTASDDG 186
Score = 27.9 bits (59), Expect = 0.97
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 70 VSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRAGDKFVC 249
++ + W+PDGR L+ + +WN T L + S + ++ A W G +
Sbjct: 84 INVVRWTPDGRRLLTG--SSTGEFTLWNGLTFNFEL-INQSHDYAVRCAEWSTDGRWLIS 140
Query: 250 GGARG 264
G G
Sbjct: 141 GDGGG 145
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPED 129
+W+F + L L GH + V + W P + L+A+G +D
Sbjct: 190 VWNFHMSTEELK----LTGHGWDVKTVDWHP-SKGLLASGSKD 227
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 27.9 bits (59), Expect = 0.97
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
LEGH GV++ A+ P +++AG + LW
Sbjct: 208 LEGHDRGVNWCAFHPTLPLILSAGDDRLVKLW 239
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 0.97
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
+W + P K ++ +L HT V +L+ SPDG+ ++ ++ W
Sbjct: 363 LWKY-PSLKNIA---NLTAHTNRVLYLSMSPDGQSIVTGAGDETLRFW 406
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 27.9 bits (59), Expect = 0.97
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 58 HTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMET-ELLHLKMTHSQEDSLT 210
H V LA + DGRY++ AG + L +W++ T + LH T + LT
Sbjct: 264 HRGPVRDLAVNRDGRYMVTAGADSL--LKVWDLRTYKELHSYYTPTPAQRLT 313
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 46 SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTH 189
+ EGHT V+ +A+ DG++L A ED + +W+M + H
Sbjct: 78 TFEGHTNNVTAIAFHCDGKWL-ATSSED-GTVKVWDMRAPSVQRNYDH 123
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
IW + + L R L+GH V A+S D YL+ A + LW
Sbjct: 241 IWSTEDMSFMLERR--LQGHQRWVWDCAFSADSTYLVTASSDHVARLW 286
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 31 LSFRK--SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNME 159
L+FR +L GH G+S + W+ +YL +A D + IW+ E
Sbjct: 84 LTFRLECTLFGHYRGISQVKWATGSKYLASA--SDDKTIRIWDFE 126
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = +1
Query: 52 EGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWHRA 231
E H+ GV+ ++WS +G Y+ A+ + + IW+ ++ + +++ +S ++ A AW
Sbjct: 228 ENHS-GVTDISWSSNGMYIAASFKKG--GILIWDTQSHEVVVELPYS---TVVALAWQPF 281
Query: 232 GDKFVCGGARGQFYHC 279
+ +G Y C
Sbjct: 282 ENVLSFTTNQGILYSC 297
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 58 HTYGVSFLAWSPDGRYLIAAG 120
HT G++ LA++ DG++L+ G
Sbjct: 12 HTDGLTRLAYTRDGKFLLTVG 32
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPD---GRYLIAAGPEDCPDLWIWNMETELL 171
IW FD +L GH +AW+P + +A+ +D +++IW E +
Sbjct: 185 IWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQD-KNVFIWTKEGDGP 243
Query: 172 HLKMTHSQEDSLTAAAW 222
K T E+ AW
Sbjct: 244 WQK-TPLTEEKFPDIAW 259
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
IWD S + L GHT + + WS R+L+ A + LW
Sbjct: 50 IWDLST----FSVSRVLTGHTRAIQSVCWSSCDRFLLTASRDWKCILW 93
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.6 bits (56), Expect = 2.2
Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 4/146 (2%)
Frame = +1
Query: 49 LEGHTYGVSFLAWSPD-GRYLIAAGPEDCPDLWIWNMETELLHLKMTHSQEDSLTAAAWH 225
++ H + ++WSPD +++ ++ C IW+ T L + S + L W
Sbjct: 227 IDAHKGSIFSISWSPDSSQFVTSSAGYSCK---IWDANTGSLIREWLSSDKKQLVGTVW- 282
Query: 226 RAGDKFVCGGARGQF-YHCALDGTLLSSWDGVR--VNALCCREDARSVLAADTHHRVRLY 396
D + ++G Y D ++ + G + + A DA A V +
Sbjct: 283 PTKDLIIVVNSKGNLTYLNPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTVLSW 342
Query: 397 DFTDLTDRNLIQEEHAVMAMTVNAAD 474
D L+ E H M + AD
Sbjct: 343 DIGKQKAFPLVGESHTNQVMQMIMAD 368
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 26.2 bits (55), Expect = 3.0
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +1
Query: 46 SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNMET------ELLHLKMTHSQEDSL 207
+L GH VS L+ SP+ Y+ A+ D +W++ + + T SQ D L
Sbjct: 350 TLSGHKNLVSGLSASPENPYMFASVSHD-NTCRVWDVRATSGSIYTISRAEKTGSQWDKL 408
Query: 208 TAAAWHRA 231
A W+++
Sbjct: 409 FAVDWNKS 416
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.8 bits (54), Expect = 3.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 139 LWIWNMETELLHLKMTHSQEDSLTAAAWH 225
LW+WN++ + LH + Q+ + WH
Sbjct: 344 LWLWNLQNKKLHTVLI--QKHHIVYFEWH 370
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 8 TSTPRLNDSPLGSP*RATLTACRSWRGAPTGGT*SPRAPRTAPT 139
TS+ N SPL + T T+C + PTGG+ S P T PT
Sbjct: 212 TSSTDTNSSPLPT----TSTSCTTSTSIPTGGSSSLSTPIT-PT 250
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 52 EGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNM 156
+GHT G+S L + P +L+ +G D + IW +
Sbjct: 263 KGHTKGISCLRFFPISGHLLLSGSMD-NQIKIWEV 296
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 1 IWDFDPEAKRLSFRKSLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLW 144
+WD + KR++ L GHT V + S DGR ++ A + LW
Sbjct: 200 LWDCVSK-KRIT---DLVGHTDNVRDILISDDGRTILTASSDATIKLW 243
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 19 EAKRLSFRKSLEGHTYGVSFLAWSPDGRY-LIAAGPEDCPDLWI 147
++ + ++RK LEG V W R+ + P+D P++WI
Sbjct: 1463 DSLKKTWRKRLEGCQKNVD--VWHNTLRFRALVLSPQDSPEMWI 1504
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 46 SLEGHTYGVSFLAWSPDGRYLIAAGPEDCPDLWIWNME 159
+L GH V+ + W P + +A +DC + +W+++
Sbjct: 310 TLRGHKGDVNAVKWMPGSKSKLATCGDDCV-VSLWDLD 346
>SPCC1020.09 |||WD repeat protein, human WDR79
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 399
Score = 24.6 bits (51), Expect = 9.0
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 85 WSPDGRYLIAAGPEDCPDLW 144
WSPDG +++ + C + W
Sbjct: 54 WSPDGSTILSLTEDQCLNCW 73
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +1
Query: 7 DFDPEAKRLSFRKSLE----GHTYGVSFLAWSPDGRYL 108
DFD E K +++ +G++ L W P GRY+
Sbjct: 547 DFDTEKKEPDALANVQQIGSAEHFGMTELEWDPSGRYV 584
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 45 VPRGPHLRRVVPGVE 89
VPRGP +R ++ GVE
Sbjct: 233 VPRGPQIRDLIRGVE 247
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 157 ETELLHLKMTHSQE--DSLTAAAWHRAGDKFVCGGARG 264
+T+++H + +E + A W G+ FV GG+ G
Sbjct: 531 KTKMIHFDGANEEEVDAGINMAQWQPKGNLFVTGGSDG 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,333,778
Number of Sequences: 5004
Number of extensions: 23703
Number of successful extensions: 198
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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