BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315B03f
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032526-1|AAH32526.1| 712|Homo sapiens mitogen-activated prote... 32 1.4
AY437560-1|AAR06179.1| 712|Homo sapiens TAK1-binding protein 3 ... 32 1.4
AY371491-1|AAQ88279.1| 712|Homo sapiens TAK1 binding protein 3 ... 32 1.4
AY331592-1|AAQ92939.1| 684|Homo sapiens NFkB activating protein... 32 1.4
AY331591-1|AAQ92938.1| 712|Homo sapiens NFkB activating protein... 32 1.4
BC025768-1|AAH25768.1| 307|Homo sapiens family with sequence si... 31 2.4
AL035309-1|CAA22914.1| 312|Homo sapiens hypothetical protein pr... 31 2.4
AL035307-1|CAA22912.1| 341|Homo sapiens hypothetical protein pr... 31 2.4
AL020997-4|CAI20567.1| 278|Homo sapiens novel protein (MGC34648... 31 2.4
AL020997-3|CAI20570.1| 307|Homo sapiens novel protein (MGC34648... 31 2.4
AL020997-2|CAI20569.1| 312|Homo sapiens novel protein (MGC34648... 31 2.4
AL020997-1|CAI20568.1| 341|Homo sapiens novel protein (MGC34648... 31 2.4
AK098318-1|BAC05285.1| 278|Homo sapiens protein ( Homo sapiens ... 31 2.4
BC039540-1|AAH39540.1| 271|Homo sapiens RELL1 protein protein. 30 5.5
AK075468-1|BAC11638.1| 271|Homo sapiens protein ( Homo sapiens ... 30 5.5
AY457063-1|AAR19397.1| 2098|Homo sapiens FYVE domain-containing ... 29 9.5
AK127769-1|BAC87123.1| 1016|Homo sapiens protein ( Homo sapiens ... 29 9.5
AK091482-1|BAC03674.1| 1026|Homo sapiens protein ( Homo sapiens ... 29 9.5
>BC032526-1|AAH32526.1| 712|Homo sapiens mitogen-activated protein
kinase kinase kinase 7 interacting protein 3 protein.
Length = 712
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 142 RALQQTSALNISLYYYVQRFPTTPTRVSRSGLLHINL*IRNLTQFH---SRTC*NGRVRT 312
RAL Q S S Y Y++ R++R+ LLHINL I + + +H GR
Sbjct: 44 RALSQES----SKYLYMEYHSPDDNRMNRNRLLHINLGIHSPSSYHPGDGAQLNGGRTLV 99
Query: 313 RHRSDGRPLARHVS 354
SDG +H +
Sbjct: 100 HSSSDGHIDPQHAA 113
>AY437560-1|AAR06179.1| 712|Homo sapiens TAK1-binding protein 3
protein.
Length = 712
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 142 RALQQTSALNISLYYYVQRFPTTPTRVSRSGLLHINL*IRNLTQFH---SRTC*NGRVRT 312
RAL Q S S Y Y++ R++R+ LLHINL I + + +H GR
Sbjct: 44 RALSQES----SKYLYMEYHSPDDNRMNRNRLLHINLGIHSPSSYHPGDGAQLNGGRTLV 99
Query: 313 RHRSDGRPLARHVS 354
SDG +H +
Sbjct: 100 HSSSDGHIDPQHAA 113
>AY371491-1|AAQ88279.1| 712|Homo sapiens TAK1 binding protein 3
protein.
Length = 712
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 142 RALQQTSALNISLYYYVQRFPTTPTRVSRSGLLHINL*IRNLTQFH---SRTC*NGRVRT 312
RAL Q S S Y Y++ R++R+ LLHINL I + + +H GR
Sbjct: 44 RALSQES----SKYLYMEYHSPDDNRMNRNRLLHINLGIHSPSSYHPGDGAQLNGGRTLV 99
Query: 313 RHRSDGRPLARHVS 354
SDG +H +
Sbjct: 100 HSSSDGHIDPQHAA 113
>AY331592-1|AAQ92939.1| 684|Homo sapiens NFkB activating protein 1
isoform B protein.
Length = 684
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 142 RALQQTSALNISLYYYVQRFPTTPTRVSRSGLLHINL*IRNLTQFH---SRTC*NGRVRT 312
RAL Q S S Y Y++ R++R+ LLHINL I + + +H GR
Sbjct: 44 RALSQES----SKYLYMEYHSPDDNRMNRNRLLHINLGIHSPSSYHPGDGAQLNGGRTLV 99
Query: 313 RHRSDGRPLARHVS 354
SDG +H +
Sbjct: 100 HSSSDGHIDPQHAA 113
>AY331591-1|AAQ92938.1| 712|Homo sapiens NFkB activating protein 1
isoform A protein.
Length = 712
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 142 RALQQTSALNISLYYYVQRFPTTPTRVSRSGLLHINL*IRNLTQFH---SRTC*NGRVRT 312
RAL Q S S Y Y++ R++R+ LLHINL I + + +H GR
Sbjct: 44 RALSQES----SKYLYMEYHSPDDNRMNRNRLLHINLGIHSPSSYHPGDGAQLNGGRTLV 99
Query: 313 RHRSDGRPLARHVS 354
SDG +H +
Sbjct: 100 HSSSDGHIDPQHAA 113
>BC025768-1|AAH25768.1| 307|Homo sapiens family with sequence
similarity 76, member A protein.
Length = 307
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 FCLFVCTFEGNLKINCTNLLQVYGAQYSREPCNKR 160
+C + F GN CTN + YG YS E C ++
Sbjct: 73 YCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQ 107
>AL035309-1|CAA22914.1| 312|Homo sapiens hypothetical protein
protein.
Length = 312
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 FCLFVCTFEGNLKINCTNLLQVYGAQYSREPCNKR 160
+C + F GN CTN + YG YS E C ++
Sbjct: 107 YCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQ 141
>AL035307-1|CAA22912.1| 341|Homo sapiens hypothetical protein
protein.
Length = 341
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 FCLFVCTFEGNLKINCTNLLQVYGAQYSREPCNKR 160
+C + F GN CTN + YG YS E C ++
Sbjct: 107 YCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQ 141
>AL020997-4|CAI20567.1| 278|Homo sapiens novel protein (MGC34648)
protein.
Length = 278
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 FCLFVCTFEGNLKINCTNLLQVYGAQYSREPCNKR 160
+C + F GN CTN + YG YS E C ++
Sbjct: 73 YCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQ 107
>AL020997-3|CAI20570.1| 307|Homo sapiens novel protein (MGC34648)
protein.
Length = 307
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 FCLFVCTFEGNLKINCTNLLQVYGAQYSREPCNKR 160
+C + F GN CTN + YG YS E C ++
Sbjct: 73 YCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQ 107
>AL020997-2|CAI20569.1| 312|Homo sapiens novel protein (MGC34648)
protein.
Length = 312
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 FCLFVCTFEGNLKINCTNLLQVYGAQYSREPCNKR 160
+C + F GN CTN + YG YS E C ++
Sbjct: 107 YCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQ 141
>AL020997-1|CAI20568.1| 341|Homo sapiens novel protein (MGC34648)
protein.
Length = 341
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 FCLFVCTFEGNLKINCTNLLQVYGAQYSREPCNKR 160
+C + F GN CTN + YG YS E C ++
Sbjct: 107 YCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQ 141
>AK098318-1|BAC05285.1| 278|Homo sapiens protein ( Homo sapiens
cDNA FLJ40999 fis, clone UTERU2016426. ).
Length = 278
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 FCLFVCTFEGNLKINCTNLLQVYGAQYSREPCNKR 160
+C + F GN CTN + YG YS E C ++
Sbjct: 73 YCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQ 107
>BC039540-1|AAH39540.1| 271|Homo sapiens RELL1 protein protein.
Length = 271
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 101 CTNLLQVYGAQYSREPCNKRLHSIFHYIIMYNGSRRHRRESRGQDYCILIFKFVISLNFT 280
C + L G R+ C++ H +H+I N SR R +G+ + + +F ++
Sbjct: 176 CGHHLHTVGGVVERDVCHRCRHKRWHFIKPTNKSRESRPRRQGEVTVLSVGRFRVT---K 232
Query: 281 VEH 289
VEH
Sbjct: 233 VEH 235
>AK075468-1|BAC11638.1| 271|Homo sapiens protein ( Homo sapiens
cDNA PSEC0162 fis, clone PLACE1009772. ).
Length = 271
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 101 CTNLLQVYGAQYSREPCNKRLHSIFHYIIMYNGSRRHRRESRGQDYCILIFKFVISLNFT 280
C + L G R+ C++ H +H+I N SR R +G+ + + +F ++
Sbjct: 176 CGHHLHTVGGVVERDVCHRCRHKRWHFIKPTNKSRESRPRRQGEVTVLSVGRFRVT---K 232
Query: 281 VEH 289
VEH
Sbjct: 233 VEH 235
>AY457063-1|AAR19397.1| 2098|Homo sapiens FYVE domain-containing
phosphoinositide kinase protein.
Length = 2098
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +2
Query: 113 LQVYGAQYSR----EPCNKRLHSIFHYIIMYN 196
L+ YG QY+R EPC +H +H YN
Sbjct: 1343 LRFYGHQYTRRANAEPCGHSIHHDYHQYFSYN 1374
>AK127769-1|BAC87123.1| 1016|Homo sapiens protein ( Homo sapiens cDNA
FLJ45870 fis, clone OCBBF3005330, highly similar to FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68).
).
Length = 1016
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +2
Query: 113 LQVYGAQYSR----EPCNKRLHSIFHYIIMYN 196
L+ YG QY+R EPC +H +H YN
Sbjct: 919 LRFYGHQYTRRANAEPCGHSIHHDYHQYFSYN 950
>AK091482-1|BAC03674.1| 1026|Homo sapiens protein ( Homo sapiens
cDNA FLJ34163 fis, clone FCBBF3014355, highly similar to
FYVE FINGER-CONTAINING PHOSPHOINOSITIDE KINASE (EC
2.7.1.68). ).
Length = 1026
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +2
Query: 113 LQVYGAQYSR----EPCNKRLHSIFHYIIMYN 196
L+ YG QY+R EPC +H +H YN
Sbjct: 271 LRFYGHQYTRRANAEPCGHSIHHDYHQYFSYN 302
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,708,828
Number of Sequences: 237096
Number of extensions: 1262179
Number of successful extensions: 2404
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2404
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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