Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315A05f
(515 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38616-1|AAA64231.1| 383|Homo sapiens brain and reproductive or... 66 7e-11
BC001251-1|AAH01251.1| 383|Homo sapiens brain and reproductive ... 66 7e-11
AY438031-1|AAR30499.1| 383|Homo sapiens BRCA1/BRCA2-containing ... 66 7e-11
AK000097-1|BAA90943.1| 415|Homo sapiens protein ( Homo sapiens ... 66 7e-11
AF420605-1|AAL17818.1| 379|Homo sapiens BRE alpha a' isoform pr... 66 7e-11
AF420603-2|AAL17816.1| 376|Homo sapiens BRE beta b isoform prot... 66 7e-11
AF420602-1|AAL17814.1| 376|Homo sapiens BRE alpha b isoform pro... 66 7e-11
AF015767-1|AAB69387.1| 383|Homo sapiens brain and reproductive ... 66 7e-11
AC021171-2|AAY24156.1| 100|Homo sapiens unknown protein. 50 5e-06
AK123076-1|BAC85532.1| 392|Homo sapiens protein ( Homo sapiens ... 43 7e-04
X83107-1|CAA58169.1| 675|Homo sapiens bmx protein. 32 1.0
BC016652-1|AAH16652.1| 675|Homo sapiens BMX non-receptor tyrosi... 32 1.0
AK130273-1|BAC85316.1| 401|Homo sapiens protein ( Homo sapiens ... 30 4.2
AF045459-1|AAC08966.1| 697|Homo sapiens Etk/Bmx cytosolic tyros... 30 4.2
BC007230-1|AAH07230.1| 494|Homo sapiens COCH protein protein. 30 5.5
AY916789-1|AAW82432.1| 550|Homo sapiens coagulation factor C ho... 30 5.5
AY358900-1|AAQ89259.1| 550|Homo sapiens COCH protein. 30 5.5
AF006740-1|AAC39545.1| 550|Homo sapiens Coch-5B2 protein. 30 5.5
>L38616-1|AAA64231.1| 383|Homo sapiens brain and reproductive
organ-expressed protein protein.
Length = 383
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 415
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 416 YKSHQ 430
Y Q
Sbjct: 124 YHQFQ 128
>BC001251-1|AAH01251.1| 383|Homo sapiens brain and reproductive
organ-expressed (TNFRSF1A modulator) protein.
Length = 383
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 415
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 416 YKSHQ 430
Y Q
Sbjct: 124 YHQFQ 128
>AY438031-1|AAR30499.1| 383|Homo sapiens BRCA1/BRCA2-containing
complex subunit 45 protein.
Length = 383
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 415
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 416 YKSHQ 430
Y Q
Sbjct: 124 YHQFQ 128
>AK000097-1|BAA90943.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ20090 fis, clone COL04151. ).
Length = 415
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 415
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 416 YKSHQ 430
Y Q
Sbjct: 124 YHQFQ 128
>AF420605-1|AAL17818.1| 379|Homo sapiens BRE alpha a' isoform
protein.
Length = 379
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 415
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 416 YKSHQ 430
Y Q
Sbjct: 124 YHQFQ 128
>AF420603-2|AAL17816.1| 376|Homo sapiens BRE beta b isoform
protein.
Length = 376
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 415
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 416 YKSHQ 430
Y Q
Sbjct: 124 YHQFQ 128
>AF420602-1|AAL17814.1| 376|Homo sapiens BRE alpha b isoform
protein.
Length = 376
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 415
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 416 YKSHQ 430
Y Q
Sbjct: 124 YHQFQ 128
>AF015767-1|AAB69387.1| 383|Homo sapiens brain and reproductive
organ-expressed protein protein.
Length = 383
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 415
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 416 YKSHQ 430
Y Q
Sbjct: 124 YHQFQ 128
>AC021171-2|AAY24156.1| 100|Homo sapiens unknown protein.
Length = 100
Score = 50.0 bits (114), Expect = 5e-06
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Frame = +2
Query: 77 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 238
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 239 EILFDVSIPWFAPDFKF-DDESFL 307
+I+F+ P PDF F +D FL
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL 93
>AK123076-1|BAC85532.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ41081 fis, clone ADRGL2009755, highly similar
to Homo sapiens brain and reproductive organ-expressed
protein (BRE) mRNA. ).
Length = 392
Score = 42.7 bits (96), Expect = 7e-04
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 WEILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVN 412
W+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 13 WDIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQ 66
Query: 413 LYKSHQ 430
Y Q
Sbjct: 67 QYHQFQ 72
>X83107-1|CAA58169.1| 675|Homo sapiens bmx protein.
Length = 675
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 492 VCRVGYLTSNNAVSMPDSLQC**LLYRLTNSNITLLKALGSLSFHLARLG 343
+ R+ + S A +PDS+ ++ L ITLLK LGS F + +LG
Sbjct: 385 ITRLRHPVSTKANKVPDSVSLGNGIWELKREEITLLKELGSGQFGVVQLG 434
>BC016652-1|AAH16652.1| 675|Homo sapiens BMX non-receptor tyrosine
kinase protein.
Length = 675
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 492 VCRVGYLTSNNAVSMPDSLQC**LLYRLTNSNITLLKALGSLSFHLARLG 343
+ R+ + S A +PDS+ ++ L ITLLK LGS F + +LG
Sbjct: 385 ITRLRHPVSTKANKVPDSVSLGNGIWELKREEITLLKELGSGQFGVVQLG 434
>AK130273-1|BAC85316.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ26763 fis, clone PRS02632, highly similar to
COCHLIN PRECURSOR. ).
Length = 401
Score = 30.3 bits (65), Expect = 4.2
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 92 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 259
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 195 KPLVQKLCSHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 254
Query: 260 IPWFAPDFKFDDES 301
A F +D +
Sbjct: 255 AKIAAVQFTYDQRT 268
>AF045459-1|AAC08966.1| 697|Homo sapiens Etk/Bmx cytosolic tyrosine
kinase protein.
Length = 697
Score = 30.3 bits (65), Expect = 4.2
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 468 SNNAVSMPDSLQC**LLYRLTNSNITLLKALGSLSFHLARLG 343
S A +PDS+ ++ L ITLLK LGS F + +LG
Sbjct: 415 STKANKVPDSVSLANGIWELKREEITLLKELGSGQFGVVQLG 456
>BC007230-1|AAH07230.1| 494|Homo sapiens COCH protein protein.
Length = 494
Score = 29.9 bits (64), Expect = 5.5
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 92 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 259
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 344 KPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 403
Query: 260 IPWFAPDFKFDDES 301
A F +D +
Sbjct: 404 AKIAAVQFTYDQRT 417
>AY916789-1|AAW82432.1| 550|Homo sapiens coagulation factor C
homolog, cochlin (Limulus polyphemus) protein.
Length = 550
Score = 29.9 bits (64), Expect = 5.5
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 92 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 259
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 344 KPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 403
Query: 260 IPWFAPDFKFDDES 301
A F +D +
Sbjct: 404 AKIAAVQFTYDQRT 417
>AY358900-1|AAQ89259.1| 550|Homo sapiens COCH protein.
Length = 550
Score = 29.9 bits (64), Expect = 5.5
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 92 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 259
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 344 KPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 403
Query: 260 IPWFAPDFKFDDES 301
A F +D +
Sbjct: 404 AKIAAVQFTYDQRT 417
>AF006740-1|AAC39545.1| 550|Homo sapiens Coch-5B2 protein.
Length = 550
Score = 29.9 bits (64), Expect = 5.5
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 92 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 259
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 344 KPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 403
Query: 260 IPWFAPDFKFDDES 301
A F +D +
Sbjct: 404 AKIAAVQFTYDQRT 417
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,926,034
Number of Sequences: 237096
Number of extensions: 1333929
Number of successful extensions: 6661
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6650
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -