Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315A05f
(515 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 27 0.11
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 27 0.11
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 23 2.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.5
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 7.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 10.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 10.0
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 27.1 bits (57), Expect = 0.11
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 495 CVCRVGYLTSNNAVSMPDS 439
CVCR+GYL + V +P S
Sbjct: 71 CVCRLGYLRNKKKVCVPRS 89
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 27.1 bits (57), Expect = 0.11
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 495 CVCRVGYLTSNNAVSMPDS 439
CVCR+GYL + V +P S
Sbjct: 71 CVCRLGYLRNKKKVCVPRS 89
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 22.6 bits (46), Expect = 2.5
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +2
Query: 134 LCKTK--IDVERISCLPDGE-ECQFRLLLPYCSKKLKWEILFDVSIPWFAPDFKFDDESF 304
+CKT+ ID ++ + + +G + + + + YC LK + D + + K E
Sbjct: 32 VCKTETGIDQQKANDVIEGNIDVEDKKVQLYCECILKNFNILDKNNVFKPQGIKAVMELL 91
Query: 305 LISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNLYKS 424
+ DEN +++ V + +E +P ++ + + V+ YK+
Sbjct: 92 I---DENSVKQLVSDCSTISEENPHLKASKLVQCVSKYKT 128
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 230 LKWEILFDVSIPWFAPDFKFDDES 301
LK+E+ F + W+ P ++ + S
Sbjct: 105 LKYEVEFLLQQQWYDPRLRYSNRS 128
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 230 LKWEILFDVSIPWFAPDFKFDDES 301
LK+E+ F + W+ P ++ + S
Sbjct: 105 LKYEVEFLLQQQWYDPRLRYSNRS 128
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 230 LKWEILFDVSIPWFAPDFKFDDES 301
LK+E+ F + W+ P ++ + S
Sbjct: 156 LKYEVEFLLQQQWYDPRLRYSNRS 179
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 230 LKWEILFDVSIPWFAPDFKFDDES 301
LK+E+ F + W+ P ++ + S
Sbjct: 105 LKYEVEFLLQQQWYDPRLRYSNRS 128
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 266 WFAPDFKFDDESFLISEDENFLE 334
W A F E+F + +D+ LE
Sbjct: 657 WAADTFAVACETFCLDDDDTLLE 679
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 7.5
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1
Query: 323 FHPHLSKNFHHQ 288
+HPH + HHQ
Sbjct: 326 YHPHRGSSPHHQ 337
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 153 MLKEYLVYLMERNANSVCYYLIVL 224
+L +YL++ M + S+C ++VL
Sbjct: 306 LLGKYLIFAMILVSISICVTVVVL 329
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 153 MLKEYLVYLMERNANSVCYYLIVL 224
+L +YL++ M + S+C ++VL
Sbjct: 306 LLGKYLIFAMILVSISICVTVVVL 329
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,300
Number of Sequences: 438
Number of extensions: 2766
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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