Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS315A03f
         (433 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQ01 Cluster: Ferritin isoform 2; n=1; Bombyx mori|Re...   155   5e-37
UniRef50_Q9N2P3 Cluster: Ferritin precursor; n=7; Obtectomera|Re...    61   1e-08
UniRef50_Q8MUW9 Cluster: Ferritin 2; n=3; Cucujiformia|Rep: Ferr...    37   0.16 
UniRef50_Q9AW08 Cluster: Putative uncharacterized protein; n=1; ...    33   1.9  
UniRef50_A0LTH5 Cluster: Rieske (2Fe-2S) domain protein; n=1; Ac...    32   4.5  
UniRef50_A5CB12 Cluster: Putative uncharacterized protein; n=1; ...    32   4.5  
UniRef50_A6GIX1 Cluster: Putative uncharacterized protein; n=1; ...    31   7.8  

>UniRef50_Q1HQ01 Cluster: Ferritin isoform 2; n=1; Bombyx mori|Rep:
           Ferritin isoform 2 - Bombyx mori (Silk moth)
          Length = 139

 Score =  155 bits (375), Expect = 5e-37
 Identities = 72/74 (97%), Positives = 72/74 (97%)
 Frame = +2

Query: 188 MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFXDNHVVANELXALA 367
           MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQF DNHVVANEL ALA
Sbjct: 1   MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALA 60

Query: 368 SLYLKRSYHYLLSA 409
           SLYLKRSYHYLLSA
Sbjct: 61  SLYLKRSYHYLLSA 74


>UniRef50_Q9N2P3 Cluster: Ferritin precursor; n=7; Obtectomera|Rep:
           Ferritin precursor - Manduca sexta (Tobacco hawkmoth)
           (Tobacco hornworm)
          Length = 232

 Score = 60.9 bits (141), Expect = 1e-08
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
 Frame = +2

Query: 188 MKVYALIVACL-ALGVLAEEDSCYQNVDQGCRR---TLSLPHCSAYYGQFXDNHVVANEL 355
           M      VACL AL      D+CYQ+V   C +   +L+LP+C+A Y ++  +  VA E+
Sbjct: 1   MNPITFFVACLLALCGAVAADTCYQDVSLDCSQVSNSLTLPNCNAVYAEYGHHGNVAKEM 60

Query: 356 XALASLYLKRSYHYLLSA 409
            A A+L+L+RSY YLLS+
Sbjct: 61  QAYAALHLERSYEYLLSS 78


>UniRef50_Q8MUW9 Cluster: Ferritin 2; n=3; Cucujiformia|Rep:
           Ferritin 2 - Apriona germari
          Length = 224

 Score = 37.1 bits (82), Expect = 0.16
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
 Frame = +2

Query: 188 MKVYALIVACLALGVLAEED----SCYQNVDQGCRRTLSLP---HCSAYYGQFXDNHVVA 346
           MK + + V+  A+ V   ED    SCY ++D  C+ +   P   +CSA YG     + V 
Sbjct: 1   MKAFIVFVSLCAVAVAQVEDHLSKSCYNDIDTICKHSKLSPKDSYCSAKYGGI---NKVQ 57

Query: 347 NELXALASLYLKRSYHYLLSA 409
             L    + +   S+HYLL A
Sbjct: 58  EGLQKFVNDHFTLSFHYLLMA 78


>UniRef50_Q9AW08 Cluster: Putative uncharacterized protein; n=1;
           Guillardia theta|Rep: Putative uncharacterized protein -
           Guillardia theta (Cryptomonas phi)
          Length = 729

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = -2

Query: 192 FIFDAIYLVANSRKNNKCV*RMSKVLPLHTLAQKATSNNDSSR*KRPHKDNRL----*FI 25
           F++++ +L   S  NN  + R+SKV+ L+ L +KAT+NN ++  K   + N+      FI
Sbjct: 268 FLYNSFFLNFFSNINNYQL-RISKVIKLNNLIKKATANNYTNSQKLYFRQNKKIFNENFI 326

Query: 24  LIFYQRYD 1
             F+Q Y+
Sbjct: 327 YSFFQLYN 334


>UniRef50_A0LTH5 Cluster: Rieske (2Fe-2S) domain protein; n=1;
           Acidothermus cellulolyticus 11B|Rep: Rieske (2Fe-2S)
           domain protein - Acidothermus cellulolyticus (strain
           ATCC 43068 / 11B)
          Length = 330

 Score = 32.3 bits (70), Expect = 4.5
 Identities = 20/53 (37%), Positives = 30/53 (56%)
 Frame = +1

Query: 253 LSERRPRMQTDFKSAALQRVLRPIQXQPRCSERTEXISLTVFETFLPLSPVGS 411
           + E RP  + D +   ++RV+RP    PR ++R E I   V  +FL LS VG+
Sbjct: 6   IHENRPTPREDIRPRVIERVIRPQDADPRRAKRAERI---VALSFL-LSAVGT 54


>UniRef50_A5CB12 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 711

 Score = 32.3 bits (70), Expect = 4.5
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 248 SCYQNVDQGCR-RTLSLPHCSAYYGQFXDNHVVANELXALASLYLKRSYHYLLS 406
           S Y +    CR +  S P C  YY QF D H V++    L  +Y +RS    LS
Sbjct: 487 SFYSSTKWSCRTQKSSSPRCGTYYLQFSDLHPVSSRF-QLGIVYTRRSRPQSLS 539


>UniRef50_A6GIX1 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 270

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +1

Query: 241 GRLMLSERRPRMQTDFKSAALQRVLRPIQXQPRCSER 351
           GR+++S R   M  D + AAL+R+L  +  Q RC E+
Sbjct: 111 GRVLVSIRFTEMPVDIEGAALERLLAFLDAQLRCFEQ 147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,927,325
Number of Sequences: 1657284
Number of extensions: 7389079
Number of successful extensions: 18030
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18028
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)