Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS315A01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 46 1e-05
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 46 1e-05
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 46 1e-05
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 46 1e-05
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 46 1e-05
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 46 1e-05
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 46 1e-05
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 46 1e-05
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 33 0.094
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 33 0.094
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 2.7
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 2.7
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 2.7
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 3.5
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 27 8.1
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde dehy... 27 8.1
AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde dehy... 27 8.1
AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde dehy... 27 8.1
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITP 521
+SK+GSL NAT+ GGG V+IENRKL+F +P
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASP 352
Score = 35.1 bits (77), Expect = 0.031
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRK 497
KSK+GS+DNA +KP GG V+ K
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQRSGSK 403
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITP 521
+SK+GSL NAT+ GGG V+IENRKL+F +P
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASP 352
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEF 506
KSK+GS+DNA +KP GG V+I ++KL +
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQILSQKLNW 406
Score = 36.3 bits (80), Expect = 0.013
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 408 NLKAVKSKIGSLDNATYKPGGGKVKIENRKLEF 506
N KA +SK+GS DN ++PGGG V+I + K+ +
Sbjct: 405 NWKA-ESKVGSKDNMNHRPGGGNVQIFDEKIRY 436
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITP 521
+SK+GSL NAT+ GGG V+IENRKL+F +P
Sbjct: 298 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASP 330
Score = 35.9 bits (79), Expect = 0.018
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKI 485
KSK+GS+DNA +KP GG V++
Sbjct: 357 KSKVGSMDNAAHKPAGGNVQV 377
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITP 521
+SK+GSL NAT+ GGG V+IENRKL+F +P
Sbjct: 298 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASP 330
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEF 506
KSK+GS+DNA +KP GG V+I ++KL +
Sbjct: 357 KSKVGSMDNAAHKPAGGNVQILSQKLNW 384
Score = 36.3 bits (80), Expect = 0.013
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 408 NLKAVKSKIGSLDNATYKPGGGKVKIENRKLEF 506
N KA +SK+GS DN ++PGGG V+I + K+ +
Sbjct: 383 NWKA-ESKVGSKDNMNHRPGGGNVQIFDEKIRY 414
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITP 521
+SK+GSL NAT+ GGG V+IENRKL+F +P
Sbjct: 172 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASP 204
Score = 35.9 bits (79), Expect = 0.018
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKI 485
KSK+GS+DNA +KP GG V++
Sbjct: 231 KSKVGSMDNAAHKPAGGNVQV 251
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITP 521
+SK+GSL NAT+ GGG V+IENRKL+F +P
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASP 352
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEF 506
KSK+GS+DNA +KP GG V+I ++KL +
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQILSQKLNW 406
Score = 36.3 bits (80), Expect = 0.013
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 408 NLKAVKSKIGSLDNATYKPGGGKVKIENRKLEF 506
N KA +SK+GS DN ++PGGG V+I + K+ +
Sbjct: 405 NWKA-ESKVGSKDNMNHRPGGGNVQIFDEKIRY 436
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITP 521
+SK+GSL NAT+ GGG V+IENRKL+F +P
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASP 352
Score = 35.1 bits (77), Expect = 0.031
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRK 497
KSK+GS+DNA +KP GG V+ K
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQRSGSK 403
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITP 521
+SK+GSL NAT+ GGG V+IENRKL+F +P
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASP 352
Score = 35.9 bits (79), Expect = 0.018
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 423 KSKIGSLDNATYKPGGGKVKI 485
KSK+GS+DNA +KP GG V++
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQV 399
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.5 bits (73), Expect = 0.094
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 342 PTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATY 458
P PT K+K P + G+ P+P K KS I NA Y
Sbjct: 491 PPPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAY 529
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.5 bits (73), Expect = 0.094
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 342 PTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATY 458
P PT K+K P + G+ P+P K KS I NA Y
Sbjct: 491 PPPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAY 529
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 93 HLKMAEVNDGVAVE---KHVEKHNTEGDNDSGVDESTQGNDLNGSPSSPNKKIVNK 251
H K+ + DG K+V K + + DSG E+ + + PS P K + NK
Sbjct: 310 HRKLFQAGDGKQATWFFKNVIKSEKDSE-DSGDSENENSSSTDSRPSKPKKNVENK 364
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 147 KHNTEGDNDSGVDESTQGNDLNGSP 221
+HNT GD+ +E GN NGSP
Sbjct: 1850 EHNTNGDHCEFCNEGHYGNATNGSP 1874
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 147 KHNTEGDNDSGVDESTQGNDLNGSP 221
+HNT GD+ +E GN NGSP
Sbjct: 1850 EHNTNGDHCEFCNEGHYGNATNGSP 1874
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 147 KHNTEGDNDSGVDESTQGNDLNGSP 221
+HNT GD+ +E GN NGSP
Sbjct: 1850 EHNTNGDHCEFCNEGHYGNATNGSP 1874
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 147 KHNTEGDNDSGVDESTQGNDLNGSP 221
+HNT GD+ +E GN NGSP
Sbjct: 1850 EHNTNGDHCEFCNEGHYGNATNGSP 1874
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 51 HDKALSSTKRAYQVHLKMAEVNDGVAVEKHVEKHNTEGDNDSGVD-ESTQGNDLNGSPSS 227
H K K ++ ++ D ++ + + HN+ D+DSG + S + L GS S
Sbjct: 3691 HPKEWKERKETFE-EIRRQTPKDPKSMSRFLNMHNSGSDSDSGSEVRSDSSSSLGGSTES 3749
Query: 228 PN 233
N
Sbjct: 3750 LN 3751
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 EVNDG-VAVEKHVEKHNTEGDNDSGVDESTQGNDLNGSPSSPNKKIVNKTP 257
EVN+ V VEK E ND +ES +G D P +N TP
Sbjct: 431 EVNESEVVVEKKETDVVVENKNDEIQNESVEGEDEYEEVEEPPSTPLNPTP 481
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 EVNDG-VAVEKHVEKHNTEGDNDSGVDESTQGNDLNGSPSSPNKKIVNKTP 257
EVN+ V VEK E ND +ES +G D P +N TP
Sbjct: 514 EVNESEVVVEKKETDVVVENKNDEIQNESVEGEDEYEEVEEPPSTPLNPTP 564
>AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform c protein.
Length = 494
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 49 GTTKPYQVLKGHIKFT*KWPKSTTELLSRSTWKNITQREITT 174
G TKP + K + K+ + E LS + WK++ +R +T
Sbjct: 17 GETKPVKFRKQQLLKLKKFIEENREALSEAVWKDLRRRHEST 58
>AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform b protein.
Length = 493
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 49 GTTKPYQVLKGHIKFT*KWPKSTTELLSRSTWKNITQREITT 174
G TKP + K + K+ + E LS + WK++ +R +T
Sbjct: 17 GETKPVKFRKQQLLKLKKFIEENREALSEAVWKDLRRRHEST 58
>AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform a protein.
Length = 493
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 49 GTTKPYQVLKGHIKFT*KWPKSTTELLSRSTWKNITQREITT 174
G TKP + K + K+ + E LS + WK++ +R +T
Sbjct: 17 GETKPVKFRKQQLLKLKKFIEENREALSEAVWKDLRRRHEST 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,073,313
Number of Sequences: 27780
Number of extensions: 246442
Number of successful extensions: 957
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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