BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS314H08f (521 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_55512| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 29 3.1 SB_52329| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_52004| Best HMM Match : rve (HMM E-Value=1.2e-16) 29 3.1 SB_44711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_43735| Best HMM Match : PHD (HMM E-Value=5.6e-06) 29 3.1 SB_43091| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_41742| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_33431| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 29 3.1 SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 29 3.1 SB_3477| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_2932| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_1421| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_58625| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_53768| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_51678| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 29 3.1 SB_45059| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 29 3.1 SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_31885| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 29 3.1 SB_27583| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_24414| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_15703| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_7494| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 29 3.1 SB_6900| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 3.1 SB_4571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_3577| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_3197| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_24| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_59142| Best HMM Match : RVT_1 (HMM E-Value=2.5e-09) 28 4.1 SB_44527| Best HMM Match : DUF1059 (HMM E-Value=3) 28 4.1 SB_26129| Best HMM Match : RVT_1 (HMM E-Value=1.2e-27) 28 4.1 SB_28694| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 28 4.1 SB_25888| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 28 4.1 SB_41413| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 28 5.4 >SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1092 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 339 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 383 >SB_55512| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 140 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) Length = 934 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_52329| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 364 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_52004| Best HMM Match : rve (HMM E-Value=1.2e-16) Length = 869 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_44711| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 714 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 88 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 132 >SB_43735| Best HMM Match : PHD (HMM E-Value=5.6e-06) Length = 772 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_43091| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 291 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_41742| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1061 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_33431| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) Length = 377 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) Length = 419 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 286 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 330 >SB_3477| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 106 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_2932| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 271 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_1421| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 212 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_58625| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 212 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_53768| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 212 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_51678| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) Length = 351 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_45059| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) Length = 519 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1396 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 722 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_31885| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) Length = 922 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_27583| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 515 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_24414| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 212 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_15703| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 124 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_7494| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) Length = 960 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_6900| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 93 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEMHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_4571| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 737 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 458 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 502 >SB_3577| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1164 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_3197| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 652 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_24| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1246 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 >SB_59142| Best HMM Match : RVT_1 (HMM E-Value=2.5e-09) Length = 772 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKVEAVQVAT 51 >SB_44527| Best HMM Match : DUF1059 (HMM E-Value=3) Length = 149 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKVEAVQVAT 51 >SB_26129| Best HMM Match : RVT_1 (HMM E-Value=1.2e-27) Length = 1036 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKVEAVQVAT 51 >SB_28694| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) Length = 1045 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLAWKNYSLATGLNEKVEAVQVAT 51 >SB_25888| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) Length = 606 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNSNAADKWKRFVLDWKNYSLATGLNEKAEAVQVAT 51 >SB_41413| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) Length = 471 Score = 27.9 bits (59), Expect = 5.4 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 367 VPPPFTLFLHRGNQSRTFGKYVFR*KNWYLPAGFEHRCIATYECT 501 +PPP L +H N + + ++V KN+ L G + A T Sbjct: 7 LPPPAPLEIHNTNAADKWKRFVLAWKNYSLATGLNEKAEAVQVAT 51 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,710,479 Number of Sequences: 59808 Number of extensions: 346308 Number of successful extensions: 682 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 652 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 682 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1172759136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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