Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314H05f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-08
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 42 3e-04
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 42 3e-04
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 42 4e-04
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 40 0.002
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 38 0.007
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 38 0.007
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 37 0.012
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 36 0.020
SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05) 36 0.020
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 36 0.027
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 35 0.047
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_57060| Best HMM Match : W2 (HMM E-Value=2.5) 34 0.082
SB_48974| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 34 0.082
SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_39482| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 33 0.14
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 32 0.25
SB_22927| Best HMM Match : SerH (HMM E-Value=1.1) 32 0.33
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 31 0.44
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 31 0.76
SB_45828| Best HMM Match : S-antigen (HMM E-Value=0.0095) 30 1.0
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_44865| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 30 1.3
SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 1.8
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 29 1.8
SB_56373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20) 29 2.3
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 2.3
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 3.1
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 28 4.1
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 28 4.1
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 28 4.1
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 4.1
SB_59680| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 28 5.4
SB_51883| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 28 5.4
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 28 5.4
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 28 5.4
SB_9805| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_42414| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 27 7.1
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_4518| Best HMM Match : CBM_14 (HMM E-Value=0.019) 27 7.1
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 27 7.1
SB_51716| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 9.4
SB_40263| Best HMM Match : zf-TAZ (HMM E-Value=1.1) 27 9.4
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4) 27 9.4
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 68.9 bits (161), Expect = 2e-12
Identities = 45/143 (31%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Frame = +3
Query: 33 TAVAAIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQ 212
T A + F ++G+Y D C+ F C +G CP L +DP +C+
Sbjct: 507 TTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAK---GRCEW 563
Query: 213 PFNVDCGDRTELQP--PKPNSQCP------------RRNGFFAHPDPSVCNIFYNCIEGE 350
VDCG R + P PKP + P ++NG +A DPS CN F C G
Sbjct: 564 ADTVDCGQRPTISPHPPKPTTMPPQPTPPKSPFCEEKKNGDYA--DPSNCNGFITCSNGY 621
Query: 351 ATEVKCTAGLHFDEYSGTCVWPD 419
A + C L FD C WP+
Sbjct: 622 AYKRDCPFNLKFDTKKLECEWPN 644
Score = 68.5 bits (160), Expect = 3e-12
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Frame = +3
Query: 63 FKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRT 242
F DG Y+D C+ F C + + CP+ L F+PT + CD P NV CG T
Sbjct: 442 FCAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTK---HCDNPENVQCGP-T 497
Query: 243 ELQPPK--PNSQCP---------RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFD 389
PK P ++ P ++NG +A D + CN F C G + C + L +D
Sbjct: 498 RPPTPKVPPTTKAPFTKSPFCVGKQNGKYA--DANNCNGFVMCSNGYIYYMDCPSNLRYD 555
Query: 390 EYSGTCVWPDS 422
G C W D+
Sbjct: 556 PAKGRCEWADT 566
Score = 59.3 bits (137), Expect = 2e-09
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Frame = +3
Query: 78 KDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDR------ 239
K+G Y D C+ F C +G A + CP L FD +K+ +C+ P V+C R
Sbjct: 601 KNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDT--KKL-ECEWPNKVNCKSRPTTVPY 657
Query: 240 -TELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWP 416
T+ PP NS+ ++NG + DP C + C G C GL F+ + C P
Sbjct: 658 VTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLP 717
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 2/130 (1%)
Frame = +3
Query: 48 IASAQFKCPAKDGQYEDDRQCDKFFECVDGVA-TTKLCPDGLVFDPTIRKINKCDQPFNV 224
+ + F +DG Y D C+ + C +G + CP GL F+ I CD P NV
Sbjct: 310 LVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAI---GMCDYPSNV 366
Query: 225 D-CGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSG 401
C + + C ++ + D C+ F C G + C +FD
Sbjct: 367 PGCSGSSG------SGFCHEKSDG-NYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKK 419
Query: 402 TCVWPDSAGR 431
C D +GR
Sbjct: 420 RCEDYDCSGR 429
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 2/116 (1%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDR--TELQP 254
DG Y+D C F C +G CP FDP + +C+ + DC R L
Sbjct: 383 DGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKK---RCE---DYDCSGRDVAYLTD 436
Query: 255 PKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 422
C R+ + DP C F +C + C L F+ + C P++
Sbjct: 437 QNDGGFCAERSD-GDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPEN 491
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 78 KDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFD 179
KDG Y D C+ F +C + + CP L F+
Sbjct: 735 KDGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFN 768
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 47.2 bits (107), Expect = 8e-06
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPP 257
+G Y D R C KF++C A CP GL + +++K CD P VDC DRT PP
Sbjct: 893 NGHYADPRDCSKFYQCDAFHRAFLHRCPAGLKW--SVKK-TACDWPRYVDC-DRTTSTPP 948
Query: 258 KPNSQCP 278
P + P
Sbjct: 949 TPTTHTP 955
Score = 46.0 bits (104), Expect(2) = 2e-08
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFECVDGVATTKL--CPDGLVFDPTIRKINKCDQPFNVDCGDRTELQP 254
+G Y D R C +F++C D T L CP GL + +++K CD P VDC DRT P
Sbjct: 1143 NGHYADPRDCSRFYQC-DAFHKTFLHRCPAGLKW--SVKK-TACDWPRYVDC-DRTTSTP 1197
Query: 255 PKPNSQ 272
P P ++
Sbjct: 1198 PTPTTK 1203
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 69 CPAK-DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRT 242
C K +G Y D R C +F++C A CP GL + +++K CD P VDC DRT
Sbjct: 1238 CKEKPNGHYADPRDCSRFYQCDAFHRAFLHRCPAGLKW--SVKK-TACDWPRYVDC-DRT 1293
Query: 243 ELQPPKPNSQCP 278
PP P P
Sbjct: 1294 TSTPPTPTPLTP 1305
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 GQYEDDRQCDKFFECVDGVATTKL--CPDGLVFDPTIRKINKCDQPFNVDCGDRT 242
G Y D R C +F++C D T L CPDGL + +++K CD P VDC DRT
Sbjct: 1349 GHYADPRDCSRFYQC-DASHKTFLHRCPDGLKW--SVKK-TACDLPLYVDC-DRT 1398
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQP- 254
+G Y D R C +F++C A C GL + +I K CD P NVDC +T P
Sbjct: 788 NGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKW--SITK-TTCDWPRNVDCDRKTPTPPS 844
Query: 255 PKPNSQCPR 281
P P + P+
Sbjct: 845 PTPPTTTPK 853
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 90 YEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDC 230
Y D R C + ++C + A K CP GL ++ I K N CD P NV+C
Sbjct: 1462 YHDPRNCSRLYQCDIFHRAFLKSCPHGLKWN--IEK-NACDHPVNVNC 1506
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPP 257
+G Y D C +F++C A CP GL + +++K CD P VDC DRT
Sbjct: 998 NGHYADPMDCSRFYQCDAFHRAFLHRCPAGLKW--SVKK-TTCDWPRYVDC-DRTPTTSG 1053
Query: 258 KPNSQCP 278
P P
Sbjct: 1054 TPTKPIP 1060
Score = 32.7 bits (71), Expect = 0.19
Identities = 37/128 (28%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Frame = +3
Query: 66 KCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCD---QPFNVDCGD 236
+CPA CD + VD TT P PTI+ CD Q N+D
Sbjct: 918 RCPAGLKWSVKKTACD-WPRYVDCDRTTSTPPTPTTHTPTIKPA--CDLHCQTLNLDGTC 974
Query: 237 RTELQPPKPNSQC-------PRRNGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDE 392
N C + NG +A DP C+ FY C + +C AGL +
Sbjct: 975 TVMPNYQVVNGMCVDTTFCKDKPNGHYA--DPMDCSRFYQCDAFHRAFLHRCPAGLKWSV 1032
Query: 393 YSGTCVWP 416
TC WP
Sbjct: 1033 KKTTCDWP 1040
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 285 NGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDEYSGTCVWP 416
NG++A DP C+ FY C + +C+ GL + TC WP
Sbjct: 788 NGYYA--DPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWP 830
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 285 NGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDEYSGTCVWP 416
NG +A DP C+ FY C T + +C AGL + C WP
Sbjct: 1143 NGHYA--DPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWP 1185
Score = 29.9 bits (64), Expect(2) = 2e-08
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 285 NGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDEYSGTCVWP 416
NG +A DP C+ FY C + +C AGL + C WP
Sbjct: 1243 NGHYA--DPRDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWP 1285
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 69 CPAKDGQYEDDRQCDKFFECVDGV--ATTKLCPDGLVFDPTIRKINKCD 209
C K + D R C K++ C DG + CP G +++ +K ++ D
Sbjct: 68 CVDKCHDFADPRDCFKYYHC-DGYDDVRWRSCPTGQLWNHVNKKCDRAD 115
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Frame = +3
Query: 45 AIASAQFKCPAKD-GQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFN 221
+I S +F C K G Y D +C F C T + CP G + T + C P
Sbjct: 103 SIGSLEF-CEGKPFGNYADTARCAGFISCASNGMTRQACPSGTQWQTTGPGVGICTCPSL 161
Query: 222 VDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSG 401
DCG + C R +PD S C+ + +C+ G + C AG +
Sbjct: 162 SDCGS-------ADGNFC-RGKADGDYPDTSRCDGYVSCVSGYIYYMPCPAGTQWKNAED 213
Query: 402 TCVWPDSA 425
CV P ++
Sbjct: 214 ACVDPSAS 221
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 50.8 bits (116), Expect = 7e-07
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 69 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDC 230
C K DG Y D + C +++C G + K CPDGL F+ I+ CD+P V+C
Sbjct: 228 CAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIK---SCDEPSKVNC 279
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 300 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKQRTGFEX 479
+ DP C+ +Y C +G + + C GL F+ +C D + C +Q+ + E
Sbjct: 236 YADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSC---DEPSKVNCVTKQRDEEEEEEK 292
Query: 480 PKE 488
K+
Sbjct: 293 VKD 295
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 279 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG 437
R +G + HPD C ++ C G A E+ C AGL++++ C WP +A +G
Sbjct: 89 RADGNYPHPD--FCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPCEG 139
Score = 35.1 bits (77), Expect = 0.035
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDC 230
DG Y C + C +G+A CP GL ++ + CD PFN C
Sbjct: 91 DGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWND---EKKYCDWPFNAPC 137
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 IVLTAVAAIASAQFKCPAKDGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKIN 200
IV +VA A + +G Y D R C +F++C A CP GL + T
Sbjct: 8 IVCFSVALATDATYCLSLPNGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVT---KT 64
Query: 201 KCDQPFNVDCGDRTELQPP 257
CD P VDC +PP
Sbjct: 65 TCDWPRYVDCDIGGAYKPP 83
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 DPSVCNIFYNCIE-GEATEVKCTAGLHFDEYSGTCVWP 416
DP C+ FY C +A C +GL + TC WP
Sbjct: 32 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWP 69
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 264 NSQCPRR-NGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSA 425
NS C +R NG +AHP+ C ++ C E +C AGL++++ C WP +A
Sbjct: 59 NSFCKKRANGDYAHPEN--CKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNA 111
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTE 245
+G Y C + C + + + CP GL ++ + CD P N C ++ +
Sbjct: 67 NGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKK---WCDWPKNAPCEEKCQ 118
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 81 DGQYEDDRQ-CDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDC 230
DG+Y D C F C + A+ K CP GL+++ K +CD P NVDC
Sbjct: 81 DGEYRDPYDACRGFIHCHNYNASYKPCPGGLLYN---EKTKQCDWPRNVDC 128
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +3
Query: 12 MRVFIVLTAVAAIASAQFK--CPAKD-GQYEDDRQCDKFFECVDGVAT-TKLCPDGLVFD 179
M+ ++L A ++A A C +D G Y D + C K+++C D T + C D L +
Sbjct: 50 MKSLVLLIACFSVARATEDDFCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWS 109
Query: 180 PTIRKINKCDQPFNVDCGDRTELQPPKPN 266
++ I CD +VDC DR L+P P+
Sbjct: 110 -AVKNI--CDHAADVDC-DRKPLKPRVPD 134
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPP 257
+G Y D R C +F++C A CP GL + T CD P VDC +PP
Sbjct: 120 NGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVT---KTTCDWPRYVDCDIGGAYKPP 176
Score = 36.3 bits (80), Expect = 0.015
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 31/166 (18%)
Frame = +3
Query: 12 MRVFIVLTAVAAIASAQFK--CPAKD-GQYEDDRQCDKFFECVDGVATT-KLCPDGLVFD 179
M+ ++L A ++A A C +D G Y D + C K+++C D T + C + L +
Sbjct: 1 MKSLVLLIACFSVARATEDDYCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWS 60
Query: 180 PTIRKINKCDQPFNVDCGDRTELQPP----------------KPN-----SQCPRRNGFF 296
++ I CD +VDC DR L+P PN C N
Sbjct: 61 -AVKNI--CDHAADVDC-DRKPLKPRCDLHCQEKGLDGSCTVMPNWRIEKGMCVDNNYCL 116
Query: 297 AHP-----DPSVCNIFYNCIE-GEATEVKCTAGLHFDEYSGTCVWP 416
P DP C+ FY C +A C +GL + TC WP
Sbjct: 117 LLPNGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWP 162
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 69 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQP 215
C K G Y D++ KF C +GV + C GLVF+P K C+QP
Sbjct: 7 CKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNP---KEKICEQP 53
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDC 230
DG Y + C F C G+A K CP GL+F+ + CD V C
Sbjct: 463 DGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLM---VCDWSHEVKC 509
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLP-IPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 426
PP L P + P +PT +STT PP S++ P +T P P P+PP
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPLPPLPP 977
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 690 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPTTDASKVPPTDASKVPPTD 749
Query: 433 KDAT 444
+A+
Sbjct: 750 ANAS 753
Score = 33.9 bits (74), Expect = 0.082
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 682 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPTTDASKVPPTD 741
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 586 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 645
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 594 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 653
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 602 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 661
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 610 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 669
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 618 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 677
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 626 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 685
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 634 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 693
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 642 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 701
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 650 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 709
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 658 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 717
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 666 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 725
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPA--SGPIPP 426
PP+ VP S PT + +T ASKV P +S P + ++ VP + +PP
Sbjct: 706 PPTDASKVPPTDASKVPPTDASKVPTTDASKVPPTDASKVPPTDANASKVPTTDASKVPP 765
Query: 427 AD 432
D
Sbjct: 766 TD 767
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV P +S P ++ P + +P D
Sbjct: 674 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPTTD 733
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 274 VPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
VP S PT + T ASKV P +S P ++ P + +PP D
Sbjct: 585 VPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 637
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 253 PPSLTHNVPAA-MDSLPIPTPLCA-ISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 426
PP+ VP ++ +PT + + T ASKV P +S P ++ P + +PP
Sbjct: 738 PPTDASKVPPTDANASKVPTTDASKVPPTDASKVPPTDASKVPTTDASKVPPTDASKVPP 797
Query: 427 AD 432
D
Sbjct: 798 TD 799
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCA-ISSTTASKVKPPRSSVRPVFISTSTPVPA--SGPIP 423
PP+ VP D+ +PT + + T ASKV P ++ V + ++ VP + +P
Sbjct: 714 PPTDASKVPPT-DASKVPTTDASKVPPTDASKVPPTDANASKVPTTDASKVPPTDASKVP 772
Query: 424 PAD 432
P D
Sbjct: 773 PTD 775
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCA--ISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 426
P + VP S PT A + +T ASKV P +S P ++ P + +PP
Sbjct: 730 PTTDASKVPPTDASKVPPTDANASKVPTTDASKVPPTDASKVPPTDASKVPTTDASKVPP 789
Query: 427 AD 432
D
Sbjct: 790 TD 791
>SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05)
Length = 85
Score = 35.9 bits (79), Expect = 0.020
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 18 VFIVLTAVAAIASAQFKCPAKD-GQYEDDRQCDKFFECVDGVATT--KLCPDGLVFDPTI 188
V ++ +A+ C KD G Y D C KF++C DG T ++C D V ++
Sbjct: 12 VLLIACFSVGLANDDDFCKEKDAGHYTDPADCAKFYQC-DGFHRTFHRMCSD--VPKWSV 68
Query: 189 RKINKCDQPFNVDC 230
K + CD NVDC
Sbjct: 69 MK-STCDHAKNVDC 81
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 35.5 bits (78), Expect = 0.027
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 CPAKD-GQYEDDRQCDKFFECVDGVAT-TKLCPDGLVFDPTIRKINKCDQPFNVDCGDRT 242
C +D G Y D + C K+++C D T + C D L + ++ I CD +VDC DR
Sbjct: 4 CKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWS-AVKNI--CDHAADVDC-DRK 59
Query: 243 ELQP 254
L+P
Sbjct: 60 PLKP 63
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 34.7 bits (76), Expect = 0.047
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Frame = +3
Query: 126 CVDGVATTKLCPDGLVFDPTIRK-INKCDQ-PFNVDCGDRTELQPP---KPNSQCPRRNG 290
C G +LCP G + T K ++ C C + + +P P CP G
Sbjct: 200 CEQGTKVPELCPQGTFSNNTGNKNVSYCFACTGGYYCQGQGKTEPTGKCDPGFYCP---G 256
Query: 291 FFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDE 392
++P P C + C +G + VKC +G + DE
Sbjct: 257 GDSNPTPYPCTKGHYCPKGTSAPVKCPSGSYQDE 290
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 261 PNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEY 395
PN Q +R P VC + C EG + C +G + DEY
Sbjct: 788 PNGQSSKR------PSAYVCTPGHYCTEGSPVKRPCASGSYQDEY 826
Score = 27.9 bits (59), Expect = 5.4
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Frame = +3
Query: 69 CPAKDGQYEDDRQCDKFFECVDGVATTKLCPDG-LVFDPTIRKINK-----CDQPFNVDC 230
CPA D ++C C GV LCP+G +D N C + +
Sbjct: 2748 CPAGYYCDPDAKKCPSHNYCPAGVTVPILCPNGTFTYDNMTGLANSSQCLPCVRGYYCRL 2807
Query: 231 GDRTELQPP----KPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKC 368
G+ TE K S P +G++ + C + + C +G + C
Sbjct: 2808 GEITEQCMGGYFCKSGSPDPNPDGYWPPVEAGPCKMGHYCPKGTQAPLPC 2857
Score = 26.2 bits (55), Expect(2) = 0.14
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 54 SAQFKCPAKDG-QYEDDRQCDKFFECVDGVATTKLCPDG 167
S + CPA + Q D+QC C +G + CP G
Sbjct: 1346 SEGYYCPAGETKQSPPDKQCQPGHYCPEGSGLHRPCPPG 1384
Score = 25.4 bits (53), Expect(2) = 0.14
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 156 CPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQCPRRNGFFA-HPDP 311
CP G+ DP ++N NV G T P CP + + HP P
Sbjct: 1398 CPPGMYCDPNEARVNFSCSSVNVSHGTITPSDCP-AGFYCPNETEWASQHPCP 1449
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 34.7 bits (76), Expect = 0.047
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Frame = +3
Query: 63 FKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKI----NKCDQPFN-VD 227
+ CP + ++ +C C+ G + +LCP G T R C + + +
Sbjct: 1198 YYCPPRSSSSKEI-ECPSGTYCIGGNSEPELCPIGTYQPNTGRTALADCTSCTEGYYCMT 1256
Query: 228 CGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLH 383
G P K CP + P P C I ++C EG + C+AG +
Sbjct: 1257 RGLSNATAPCKAGWYCPTGSSV---PTPRECPIGFHCPEGSSLPKPCSAGFY 1305
Score = 28.3 bits (60), Expect = 4.1
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Frame = +3
Query: 90 YEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRK-INKCDQ-PFNVDCGD---RTELQP 254
Y D C F C G A + CP G + T R + +C CGD + P
Sbjct: 708 YTDAGPCPAGFYCPLGTAEPEKCPPGTFSNITKRSALEQCTNCTSGFYCGDYNLTSVTAP 767
Query: 255 PKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAG 377
+ CP +G + PD C C EG +C G
Sbjct: 768 CQAGYYCP--SG-ASRPDWIECPPGSYCGEGSGAPERCPRG 805
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 45 AIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIR 191
AI S+Q+ CP DG + D ++ C CPD + + I+
Sbjct: 2171 AILSSQYDCPTSDGFFPDPASNGRYIHCSGNSPEIMSCPDKMTWQNDIK 2219
>SB_57060| Best HMM Match : W2 (HMM E-Value=2.5)
Length = 152
Score = 33.9 bits (74), Expect = 0.082
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 250 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFIST 390
SPPS + + P A L +PTP + TT K K SVR T
Sbjct: 99 SPPSSSPSTPFARSKLALPTPPYSTPRTTKPKAKKSAESVRKQIAKT 145
>SB_48974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 33.9 bits (74), Expect = 0.082
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 250 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFIST 390
SPPS + + P A L +PTP + TT K K SVR T
Sbjct: 99 SPPSSSPSTPFARSELALPTPPYSTPRTTKPKAKKSAESVRKQIAKT 145
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 33.9 bits (74), Expect = 0.082
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 183 TIRKINKCDQ--PFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEAT 356
T R I++C++ ++ CG R P N C +GF PD CN C++
Sbjct: 180 TCRDIDECEELKKTSLSCGQRCLNFPGGYNCTC--NSGFILIPDNRTCNDTDECLDSNTC 237
Query: 357 EVKCT 371
+ CT
Sbjct: 238 QQTCT 242
>SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 33.9 bits (74), Expect = 0.082
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 250 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKV-KPPRSSVRPVFISTSTPVPASGPI 420
SPPS + + P A L +PTP + TT K K S+ V T TP+ S P+
Sbjct: 99 SPPSSSPSTPFARSKLALPTPPYSTPRTTRPKAEKSAESTALRVGKHTHTPLVGSQPL 156
>SB_39482| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 33.9 bits (74), Expect = 0.082
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 250 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFIST 390
SPPS + + P A L +PTP + TT K K SVR T
Sbjct: 99 SPPSSSPSTPFARSKLALPTPPYSTPRTTKPKAKKSAESVRKQIAKT 145
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +3
Query: 12 MRVFIVLTAVAAIASAQFK--CPAKD-GQY-EDDRQCDKFFECVDGVATTKLCPDGLVFD 179
M++ I + A A + ++ C K G Y D C ++ C G A K C G V+D
Sbjct: 1 MKIVIYVLAFAGLVASVHADLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60
Query: 180 PTIRKIN 200
P I N
Sbjct: 61 PRITNCN 67
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 303 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 413
PD + C +Y+C G+A C G +D C W
Sbjct: 32 PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 81 DGQYEDDRQCDKFFECVDGVATTKLCPDGL 170
DG Y +CD + C +G+A CP GL
Sbjct: 341 DGNYAHPSKCDMYITCSNGIAHEMPCPAGL 370
>SB_22927| Best HMM Match : SerH (HMM E-Value=1.1)
Length = 678
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 154 SLVVATPSTHSKNLSHCLSSSYWPSL 77
S+ T ST N SH SSS+WPS+
Sbjct: 259 SVTSVTQSTEGNNKSHATSSSFWPSV 284
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 238 GLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTP 399
GL++ P + + P+ PIP +SST S + + + P +ST TP
Sbjct: 771 GLSAGPGVSSTSAPSNNHDQPIPAIPSLMSSTLTSSISTTSTGMPPASLSTPTP 824
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 45 AIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFD 179
++A + C + DG + D + CV GV C DGLV++
Sbjct: 164 SLAILESYCKSPDGMFADPYNEAGYIHCVSGVGKRVNCGDGLVWE 208
>SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 31.1 bits (67), Expect = 0.58
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +1
Query: 271 NVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIP 423
+VP + + + TP I S V PP SS PV ISTS P A+ P P
Sbjct: 486 DVPGSSSMMDVTTPSSGIYSMPVLGV-PPASSGIPVSISTSNP-NATSPRP 534
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 30.7 bits (66), Expect = 0.76
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 295 LPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPAS-GPIPPADKDAT 444
+P PT S+T + K ++ +PV T TP P + PI P D T
Sbjct: 117 IPCPTATATTSTTATTPAKTTSATTKPVMTPT-TPAPMTLPPISPIDPPRT 166
>SB_45828| Best HMM Match : S-antigen (HMM E-Value=0.0095)
Length = 250
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
P + VP S PT + T ASKV P +S P ++ P +PP D
Sbjct: 56 PTTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPTTDASKVPTTDVSKVPPTD 115
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + T ASKV +S P + P + +PP D
Sbjct: 64 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPTTDASKVPTTDVSKVPPTDASKVPPTD 123
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
PP+ VP S PT + +T ASKV S P ++ P + +PP D
Sbjct: 72 PPTDASKVPPTDASKVPPTDASKVPTTDASKVPTTDVSKVPPTDASKVPPTDASKVPPTD 131
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCA-ISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPA 429
PP+ VP D+ +PT + + +T SKV P +S P ++ P + +PP
Sbjct: 80 PPTDASKVPPT-DASKVPTTDASKVPTTDVSKVPPTDASKVPPTDASKVPPTDASKVPPT 138
Query: 430 D 432
D
Sbjct: 139 D 139
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVR--PVFISTSTPVPASGPIPP 426
P + VP S PT + T ASKV PP +++ P +S P AS +PP
Sbjct: 104 PTTDVSKVPPTDASKVPPTDASKVPPTDASKV-PPTDAIKAPPTHVSKVPPTDAS-KVPP 161
Query: 427 AD 432
D
Sbjct: 162 TD 163
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 253 PPSLTHNVPAA-MDSLPIPTPLCA-ISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 426
PP+ VP ++ +PT + + +T ASKV P +S P ++ P + +PP
Sbjct: 30 PPTDASKVPPTDANASKVPTTDASKVPTTDASKVPPTDASKVPPTDASKVPPTDASKVPP 89
Query: 427 AD 432
D
Sbjct: 90 TD 91
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 322 ISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPADKDAT 444
+ T ASKV P +S P ++ P + +PP D +A+
Sbjct: 5 VPPTDASKVPPTDASKVPTTDASKVPPTDASKVPPTDANAS 45
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCA-ISSTTASKVKPPRSSVRPVFISTSTPVPA--SGPIP 423
PP+ VP D+ +PT + + T ASKV P ++ V + ++ VP + +P
Sbjct: 6 PPTDASKVPPT-DASKVPTTDASKVPPTDASKVPPTDANASKVPTTDASKVPTTDASKVP 64
Query: 424 PAD 432
P D
Sbjct: 65 PTD 67
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPAD 432
P + VP S PT + T ASKV P +S P + P +PP D
Sbjct: 96 PTTDASKVPTTDVSKVPPTDASKVPPTDASKVPPTDASKVPPTDAIKAPPTHVSKVPPTD 155
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 247 SSPPSLTHNVPAAMDSLPIPTPLCAISST--TASKVKPPRSSVRPVFISTSTPVPAS-GP 417
S PS ++PA + P TP+ ISST A PP + P + S PVP+ P
Sbjct: 889 SYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQAPPTLPPTTLTTPSW-SQPVPVPSMYQP 947
Query: 418 IPP 426
PP
Sbjct: 948 QPP 950
>SB_44865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 250 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVK 351
SPPS + + P A L +PTP + TT K K
Sbjct: 99 SPPSSSPSTPFARSKLALPTPPYSTPRTTGPKAK 132
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 219 NVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYS 398
N G+ P NS+ P+ + P C Y C G+ TE KC G++ EYS
Sbjct: 1401 NAGSGEVFFRAPSMTNSEYPKNST--EKPMCRRCQTGYYC-PGDGTETKCALGVNTTEYS 1457
>SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 199 LIFLIVGSNTRPSGQSLVVATPSTHSKNLSHCLSSSYWPSLAGHLNWALAIAATAVNTM 23
L L GS+ SL+VA L++C+ S+ + L L W LA A N++
Sbjct: 487 LTLLAAGSSVPDVMSSLIVAKHGMGDMALANCIGSNIFDVLCLGLPWLLATTAVHPNSV 545
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 298 PIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 426
P P PL I ++ S V PP P +S + P+P P PP
Sbjct: 678 PPPPPLPVIEGSSLS-VPPPPPPPPPPLLSGTLPMPPPPPPPP 719
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 69 CPAKDGQYEDDRQCDKFFECVDGVATTKL--CPDGLVFDPTIRKINKCD 209
C K + D + C K++ C DG +L CP G +++ +K ++ D
Sbjct: 1492 CVDKCHDFADPKDCSKYYHC-DGYDDGRLRSCPTGQLWNHVNKKCDRAD 1539
>SB_56373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 237 RTELQPPKPNSQCPRRNGFFAHPDP 311
RT PPKP + P NG HP P
Sbjct: 87 RTRAFPPKPFAVIPHPNGTVVHPHP 111
>SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20)
Length = 772
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = +3
Query: 54 SAQFKCPAKDGQ-YEDDRQCDKFFECVDGVATTKL-CPDGLVFDPT---IRKINKCDQPF 218
S +F+C +G+ + CD F CVDG T+ CP + P+ I CD
Sbjct: 93 SGEFQCD--NGKCIRKNLYCDGDFACVDGSDETRCECPSNMFLCPSGECIMGTQLCDG-- 148
Query: 219 NVDCGDRTELQPPKPNSQC 275
DC D T+ + ++C
Sbjct: 149 KKDCTDNTDEKNCAHKTEC 167
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSL-----PIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGP 417
P L H++P D + P+P P A S A PP P P P G
Sbjct: 270 PDVLEHDIPEVPDIVTGGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGG 329
Query: 418 IPP 426
PP
Sbjct: 330 APP 332
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +1
Query: 298 PIPTPLCAISSTTASKVKPPRSSVRPVFISTST----PVPASGPIPPA 429
P TP+ STT K P + ++P +TST P P++ PI P+
Sbjct: 1310 PSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTSTTPIKPSPSTTPIKPS 1357
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 283 RRGHCELGLGGWSSVLSPQST-LKGWSHLLIFLIVGSNTRPSGQSLVVATPSTHSKNLSH 107
+R H L +GG S L QST L+G S + G+S+ P+ K +S
Sbjct: 2018 QRKHVSLAIGGLLSALDKQSTVLRGSSKTSHSSLSSQGEVQKGESIKPVNPTYQPKKISS 2077
Query: 106 CLS 98
+S
Sbjct: 2078 SVS 2080
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 426
PP++ A + P + A SS + VK P SV TPV A P PP
Sbjct: 347 PPAVPTPATAPPPVVAPPPSVFASSSGVPTPVKAPPPSVFASSSGVPTPVAAPPPAPP 404
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 241 LNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKV 348
L+ SP H +PA S +PT C TT S V
Sbjct: 915 LHPSPTDTDHALPALNPSNTVPTNCCPSGETTPSAV 950
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSS-VRPVFISTSTPVPASGPIPP 426
PP N P M S P P P ++ +S+ +PP + V P S P+P + PP
Sbjct: 883 PPGNQVNPP--MSSQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPLPGNQVNPP 939
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 241 LNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRS 363
LN+ PP H P +D LP P L +++ P+S
Sbjct: 186 LNTLPPVPAHRPPQPVDVLPPPPKLAKTKPVPPPRLQVPKS 226
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 235 IGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVP--- 405
+G+ +PP + PAA P P+ T S + PP PV +TS P P
Sbjct: 301 LGVGEAPPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPP-----PVPSATSAPPPWAT 355
Query: 406 -ASGPIP 423
SGP P
Sbjct: 356 SNSGPKP 362
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 283 AMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPADKDA 441
A + P TP C S ++P S+ P T P P + P PP K A
Sbjct: 84 APECAPTNTPECCRSQALQLNIRPALSA-NPA--PTEKPEPTTRPSPPTQKQA 133
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 286 MDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPADKDAT 444
+++ P P P S T + V P R+ + P+ TP PA P A DAT
Sbjct: 25 LETTPAPAPTTPTSPATPASVAPIRTPI-PL---KETPSPALESAPAAMPDAT 73
>SB_59680| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 412
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = -2
Query: 520 ATICPWASTSCSLGHSXPVLCFFCCSLHPCLPAESGQTQVPEYSSK*RPAVHLTSVASPS 341
A P+AS S S + PC+P + Q P +S+ RPA +P+
Sbjct: 15 AMASPYASAMASPYASAMASPYASAMSAPCVPTPANPCQTPAAASQARPAPGRAPARNPA 74
Query: 340 MQ 335
Q
Sbjct: 75 QQ 76
>SB_51883| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 295
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 280 AAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 426
AA +P P+ C ++ A PP RP+ + +PVP + P
Sbjct: 23 AAQSPVP-PSHQCRPMTSAAQSPVPPNHQCRPITSAAQSPVPPNHQYTP 70
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +1
Query: 235 IGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASG 414
+G++ P SL + + P P A+ TAS R + STST PA
Sbjct: 449 LGVSLGPRSLDEALEGKITRAPSIAPETALPVNTASPHTVHREFIVTTCASTSTESPAV- 507
Query: 415 PIPPA 429
P+ PA
Sbjct: 508 PVKPA 512
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +1
Query: 247 SSPPSLTHNVPAAMDSLPI----PTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASG 414
S P SLT P P+ P PL A PPR RP+ + TP P
Sbjct: 833 SRPDSLTMEAPTTKTDRPLSPSAPPPLPP-RPVGAPPSLPPRPRTRPLPPKSDTPPPP-- 889
Query: 415 PIPPADK 435
P P AD+
Sbjct: 890 PRPAADE 896
>SB_9805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +3
Query: 24 IVLTAVAAIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINK 203
+V+ A + +FKC A Q ED+ + VD L L P+ IN+
Sbjct: 22 VVVAIHACLLDREFKCVASGNQEEDESKMYDITVNVDDFTDDDLDYTTLQTQPS-TSINQ 80
Query: 204 CDQPFN 221
C Q F+
Sbjct: 81 CFQQFD 86
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +3
Query: 231 GDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCV 410
GD E+ N C R DP C G+A E C G SG C
Sbjct: 1322 GDGCEIPDCPGNPDCAGRGHCNTSFDPPRCTNCSQGWMGQACEDLCVHGTQVPMDSGNCQ 1381
Query: 411 WPDSAGRQGCN 443
+GCN
Sbjct: 1382 CDACFTGRGCN 1392
>SB_42414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -2
Query: 199 LIFLIVGSNTRPSGQSLVVATPSTHSKNLSHCLSSSYWPSLAGHLNWALAIA 44
+ FL GS+ + SLVVA + +S+C+ S+ + L + W + A
Sbjct: 235 MTFLAAGSSLPDAIASLVVAKQGSGDMAVSNCIGSNVFDMLCLGIPWLIKSA 286
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 247 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 426
S PP P+ + TPL S +T K K ++ V+ V+ + P P P PP
Sbjct: 279 SKPPLSPFMTPSPDTATEKVTPLPKGSLSTLEKKKLTQTLVQDVWQDITAPKPLPRPKPP 338
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 322 ISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPADKDAT 444
I +TTAS+ KPP ++R +T+T VPA+ P P K T
Sbjct: 1437 IPTTTASETKPP--TIRKTTTATTT-VPATKP-PTTRKTTT 1473
>SB_4518| Best HMM Match : CBM_14 (HMM E-Value=0.019)
Length = 86
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +3
Query: 48 IASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTI 188
+A+ Q+ DG+Y F C G+ CP G FD +
Sbjct: 36 LAAYQYCATRPDGRYPAQPSTRGFIVCSKGMTKHVDCPQGQTFDSNL 82
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Frame = +1
Query: 238 GLNSSPPSLTHNVPAAMDSLPI----PTPLCAISSTTASKVKPPRSSVRPVFISTSTPVP 405
G S+ PS + PA + P+ PTP C S+ + P + P + S P P
Sbjct: 1070 GPGSNQPSDKIHSPATSHTSPVSTHLPTPNCHTSTPHTTTTTPNSNEQCPNTAAGSVPPP 1129
Query: 406 ----ASGPIPPADKDAT 444
A+ P+P D T
Sbjct: 1130 PSSTANAPVPDDAPDLT 1146
>SB_51716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 304 PTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGP 417
P P+ ++T S PP + +P+ S T PAS P
Sbjct: 82 PRPVARPATTLPSLPSPPSQAEQPLLPSPPTGTPASVP 119
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 27.1 bits (57), Expect = 9.4
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 10/98 (10%)
Frame = +3
Query: 153 LCPDGLVFDPTIRKIN--KCDQPFNVDCGDRTE-LQP---PKPNS----QCPRRNGFFAH 302
L PD D ++I + +P+ DC T L+P PKP C RR G
Sbjct: 4864 LGPDAFCVDSNGKEIQGTRVLRPYRPDCEAPTSALRPGRCPKPWKGIFRACDRR-GDACQ 4922
Query: 303 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWP 416
D N C G + C +G D Y G CV P
Sbjct: 4923 KDTDCKNNHKCCFNGCQND--CVSGDPSDRYGGPCVKP 4958
>SB_40263| Best HMM Match : zf-TAZ (HMM E-Value=1.1)
Length = 1033
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 303 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCV 410
PDPSV + + +G V C G D Y GT V
Sbjct: 986 PDPSVAHRYRK--QGRPVPVPCKRGEKVDAYKGTVV 1019
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 241 LNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 420
+N +PPS T + P S I TP +S + P+SS P S+++P P S I
Sbjct: 495 MNLTPPSSTIHTP---QSSTIHTP-------QSSTIHTPQSSTNPTPQSSTSPTPQSSTI 544
>SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4)
Length = 582
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 247 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKV---KPPRSSVRPVFISTSTPVPASGP 417
S P+L H + S+ LC + KV PRS +PVF+ST +P GP
Sbjct: 519 SDTPALPHGYEYRLSSVN-SEELCHLKEQLKEKVCDYLEPRS--QPVFVSTLCHLPQFGP 575
Query: 418 I 420
+
Sbjct: 576 L 576
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.123 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,571,097
Number of Sequences: 59808
Number of extensions: 378277
Number of successful extensions: 1322
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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