Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314G12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 192 1e-49
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 192 2e-49
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 51 6e-07
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 50 9e-07
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 32 0.24
11_01_0617 - 4939108-4939259,4939584-4940259 32 0.32
11_06_0092 + 19973364-19975983,19976272-19976648 31 0.42
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 30 0.98
05_03_0246 + 10895627-10895829,10897012-10897078,10898258-108984... 29 1.7
04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 29 2.3
02_01_0299 + 2001938-2002510,2002821-2003033,2003129-2003333,200... 28 4.0
12_02_0881 - 23970143-23970433,23970814-23971116,23971490-239720... 28 5.2
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 28 5.2
11_06_0690 + 26303733-26306540 27 6.9
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 27 6.9
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 27 6.9
02_04_0098 + 19701999-19702185,19703698-19704551,19704732-197048... 27 6.9
07_01_0507 + 3777505-3777762,3780286-3780390,3780740-3780796,378... 27 9.1
05_03_0628 - 16367841-16369259 27 9.1
03_02_0211 - 6436275-6436361,6436969-6437235,6438475-6438543,643... 27 9.1
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 192 bits (468), Expect = 1e-49
Identities = 96/158 (60%), Positives = 116/158 (73%), Gaps = 5/158 (3%)
Frame = +2
Query: 62 MASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEG 241
MA + T + E E +GYV VSGPVV A+ M G+AMYELVRVG++ L+GEIIRLEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 242 DMATIQVYEETSGVTVGDPVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDINELTQ 406
D ATIQVYEET+G+ V DPVLRT K PLSVELGPGILG+IFDGIQRPLK I +
Sbjct: 61 DSATIQVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSG 120
Query: 407 SIYIPKGINVPSLAREVDWEFNPLNVKVGSHITGGDLY 520
+YIP+G++VP+L ++ W F P + VG ITGGDLY
Sbjct: 121 DVYIPRGVSVPALDKDALWHFKPEKLGVGDIITGGDLY 158
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 192 bits (467), Expect = 2e-49
Identities = 92/136 (67%), Positives = 109/136 (80%)
Frame = +2
Query: 113 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVG 292
R G V AVSGPVV A+ M G+AMYELVRVG + L+GEIIRLEGD ATIQVYEET+G+ V
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVN 115
Query: 293 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWEFN 472
DPVLRT KPLSVELGPGILG+IFDGIQRPLK I + +YIP+G++VP+L ++ W+F
Sbjct: 116 DPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLWDFE 175
Query: 473 PLNVKVGSHITGGDLY 520
P + VG ITGGDLY
Sbjct: 176 PKKLGVGDAITGGDLY 191
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +2
Query: 125 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 292
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 64 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 123
Query: 293 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 418
V TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 124 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 165
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 50.4 bits (115), Expect = 9e-07
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +2
Query: 125 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 292
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 24 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 83
Query: 293 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 418
V TG+ L + +LG +F+G +P+ + + Y+
Sbjct: 84 TTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYL 125
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 158 EKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVE 331
EKMS + EL+ +GYN+L G I M + + + ++ +G + G LS++
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAIPESIATMGNLGLLDVSNNHILGPLPTQIGTLLSIQ 526
>11_01_0617 - 4939108-4939259,4939584-4940259
Length = 275
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 80 LRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATI 256
L +A EE+EER G F V+ + +A+++ VR+G LVG ++ + +A +
Sbjct: 116 LLDMAMEEDEERGGARFRVADVLEKQNGRRETALHDAVRLGDERLVGHLMAVHPRLARL 174
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 31.5 bits (68), Expect = 0.42
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 215 VGEIIRLEGDMAT--IQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 382
VG GD+ + I V E +G+ D RTG L + PG+ G + D + R L
Sbjct: 877 VGNTASTHGDIYSYGILVLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 214 EFIVTDTDQLVHSRSGHFFGSDDGSRYGEDISEPLL 107
EF+V +T++L H + G + D+ + ED+ EPLL
Sbjct: 115 EFMVRETEKL-HQQVGRYKSPDEHPFFPEDLPEPLL 149
>05_03_0246 +
10895627-10895829,10897012-10897078,10898258-10898433,
10898450-10898583,10900165-10901594
Length = 669
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 323 TKAFQYGVLDHLQLHLKFLRIPGWWPCHLQDG*SHRRVHCNRH 195
T AF Y L H L L+ P W P + R V NRH
Sbjct: 247 TAAFPYNCLIHAHLRLRGSASPPWGPLRIFSAMLARGVRPNRH 289
>04_04_0028 -
22243272-22243577,22244564-22244713,22244919-22245656,
22247233-22247331,22247541-22247933,22248806-22248961
Length = 613
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 150 SLPKKCPDLLCTSWSVSVTMNSSVRLSVLKVTW 248
+ P CPDL+CT S + ++R SVL W
Sbjct: 210 AFPGCCPDLICTILS-KLPQKEAIRTSVLSSKW 241
>02_01_0299 +
2001938-2002510,2002821-2003033,2003129-2003333,
2003485-2003560,2003665-2003800,2003905-2004009,
2004095-2004172,2004264-2004353,2004441-2004506,
2004836-2004892,2004996-2005073,2005165-2005212,
2005330-2005401
Length = 598
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 59 KMASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEII 229
K + G + T+A+ E EE+ G +F GP+ + G+ ++ VG +G I+
Sbjct: 124 KFSRLGQMSTVASPEQEEQEGVLFRGGGPMCDF-AVPGAQDTTVLVVGATSRIGRIV 179
>12_02_0881 -
23970143-23970433,23970814-23971116,23971490-23972077,
23972606-23972761,23972852-23972910,23974294-23974561
Length = 554
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 320 LSVELGPGILGSIFDGIQRPLKDINELTQSI---YIPKGINVPSLAREVDWE 466
L LGP +LG DG R ++D+ + I +P + VP E W+
Sbjct: 92 LGRRLGPRLLGRGNDGSMRVMRDLYRMLDEINSEEVPVDLKVPDSFDEFIWD 143
>07_03_0537 -
19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 LDPSSLPKKC--PDLLCTSWSVSVTMNSSVRLSVLKVTWPPSRYTKK 272
+DP+S+PK C PD LC S + V+ N LK + P R+ ++
Sbjct: 856 VDPASIPKHCAAPDNLCFSRTWLVSFN-------LKEIYAPDRFARQ 895
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 127 DISEPLLILLIGDRPQAAFARHFELVILYPRRERWKRRTENG 2
D + PL + L+G RP+ + R + V+ Y R + +NG
Sbjct: 827 DFAAPLTMALLGRRPRPSRVRQRQQVVPYSPRRSNRLAAKNG 868
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVV-TAEKMSGSA 178
GG RT E+ EE+ V V GP++ K SG A
Sbjct: 621 GGARTAEKEDYEEKLKEVEQVCGPIIKQVYKKSGDA 656
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 497 GIRP*HLMG*IPSRPPWPGKAR 432
G RP MG PS PP PG++R
Sbjct: 33 GRRPASAMGQAPSSPPGPGRSR 54
>02_04_0098 +
19701999-19702185,19703698-19704551,19704732-19704890,
19705290-19705537,19705837-19705927,19706066-19706251
Length = 574
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 332 LGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWEFNPL 478
L G ++ GI RP +IN Q+I PK + P L V +NP+
Sbjct: 126 LPDGTPAILYTGIDRP--NINYQVQNIAFPKNASDPLLREWVKPAYNPV 172
>07_01_0507 +
3777505-3777762,3780286-3780390,3780740-3780796,
3781534-3781863
Length = 249
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 304 PYWKAFVSRTWSWYLGFHL*RYSASPQGHQRADSVHLHP 420
P K WSW L HL RY++ P ++ + L P
Sbjct: 209 PPMKVSRKEDWSWELSNHLYRYNSIPDTDKKGCTGPLFP 247
>05_03_0628 - 16367841-16369259
Length = 472
Score = 27.1 bits (57), Expect = 9.1
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +2
Query: 11 GSSFPSFSSRIKNN*FKMASKGGLRTIANEENEERFGYVFAVSGPVVTAEK------MSG 172
GSSFPSFS NN +S L T A E ++F GPV T E+ +
Sbjct: 299 GSSFPSFSIGASNN---GSSSPALATSA--EAPKKFA---MPEGPVETGEENEKAIFTAD 350
Query: 173 SAMYELVRVGYNE 211
SA+YE + G+ E
Sbjct: 351 SALYEYLDGGWKE 363
>03_02_0211 -
6436275-6436361,6436969-6437235,6438475-6438543,
6439108-6439236,6439319-6439480,6439558-6439678,
6439813-6439928,6440697-6440762,6441010-6441091,
6441236-6441327,6441430-6441537,6441919-6442013,
6442092-6442234,6442336-6442364,6442452-6442571,
6442645-6442734,6443116-6443181,6443267-6443380,
6443482-6443574
Length = 682
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 433 VDTLGDVDGLSQLVDVLEGTLNTVKDGTQDTR 338
+D++ D+D L L D L+G N + D + + R
Sbjct: 201 LDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIR 232
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,630,229
Number of Sequences: 37544
Number of extensions: 300373
Number of successful extensions: 922
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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