Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314G12f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 206 5e-54
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 52 2e-07
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 52 2e-07
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 50 7e-07
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 50 7e-07
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 50 7e-07
At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria... 40 0.001
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,... 40 0.001
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria... 40 0.001
At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR... 30 1.1
At1g55390.1 68414.m06335 DC1 domain-containing protein similar t... 29 2.5
At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to ... 28 3.3
At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to ... 28 3.3
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 28 3.3
At3g29200.1 68416.m03662 chorismate mutase, chloroplast (CM1) id... 28 4.4
At3g01040.1 68416.m00005 glycosyl transferase family 8 protein c... 27 5.8
At2g41820.1 68415.m05168 leucine-rich repeat transmembrane prote... 27 5.8
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 27 7.7
At3g16820.1 68416.m02148 F-box family protein contains Pfam PF00... 27 7.7
At2g39730.3 68415.m04879 ribulose bisphosphate carboxylase/oxyge... 27 7.7
At2g39730.2 68415.m04878 ribulose bisphosphate carboxylase/oxyge... 27 7.7
At2g39730.1 68415.m04877 ribulose bisphosphate carboxylase/oxyge... 27 7.7
At2g01690.2 68415.m00097 expressed protein 27 7.7
At2g01690.1 68415.m00096 expressed protein 27 7.7
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 206 bits (504), Expect = 5e-54
Identities = 97/149 (65%), Positives = 118/149 (79%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMAT 253
G L T ++E E +GYV VSGPVV A+ M+G+AMYELVRVG++ L+GEIIRLEGD AT
Sbjct: 7 GKLTTFEDDEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSAT 66
Query: 254 IQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGIN 433
IQVYEET+G+TV DPVLRT KPLSVELGPGILG+IFDGIQRPLK I ++ +YIP+G++
Sbjct: 67 IQVYEETAGLTVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIARISGDVYIPRGVS 126
Query: 434 VPSLAREVDWEFNPLNVKVGSHITGGDLY 520
VP+L ++ WEF P G ITGGDLY
Sbjct: 127 VPALDKDCLWEFQPNKFVEGDTITGGDLY 155
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +2
Query: 125 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 292
V V+GP+V EK+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 23 VSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 82
Query: 293 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 418
V TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 83 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 124
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +2
Query: 125 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 292
V V+GP+V EK+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 23 VSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 82
Query: 293 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 418
V TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 83 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 124
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 50.4 bits (115), Expect = 7e-07
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +2
Query: 125 VFAVSGPVVTAEKMSGSAMYELVRVGYNE---LVGEIIRLEGDMATIQVYEETSGV-TVG 292
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 22 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKF 81
Query: 293 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 418
V TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 82 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 50.4 bits (115), Expect = 7e-07
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +2
Query: 125 VFAVSGPVVTAEKMSGSAMYELVRVGYNE---LVGEIIRLEGDMATIQVYEETSGV-TVG 292
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 22 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKF 81
Query: 293 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 418
V TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 82 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 50.4 bits (115), Expect = 7e-07
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +2
Query: 125 VFAVSGPVVTAEKMSGSAMYELVRVGYNE---LVGEIIRLEGDMATIQVYEETSGV-TVG 292
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 22 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKF 81
Query: 293 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 418
V TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 82 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
identical to SP|P83484 ATP synthase beta chain 2,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452187|dbj|AK118582.1|
Length = 556
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 272 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 445
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 141 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198
>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
putative strong similarity to SP|P83483 ATP synthase
beta chain 1, mitochondrial precursor (EC 3.6.3.14)
{Arabidopsis thaliana}, SP|P17614 ATP synthase beta
chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
plumbaginifolia}; contains Pfam profiles PF00006: ATP
synthase alpha/beta family nucleotide-binding domain,
PF00306: ATP synthase ab C terminal, PF02874: ATP
synthase alpha/beta family beta-barrel domain
Length = 559
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 272 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 445
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 144 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 201
>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
identical to SP|P83483 ATP synthase beta chain 1,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452102|dbj|AK118538.1|
Length = 556
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 272 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 445
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 141 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198
>At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1059
Score = 29.9 bits (64), Expect = 1.1
Identities = 9/34 (26%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 380 LKDINELTQSIYIPKGIN-VPSLAREVDWEFNPL 478
L+ + + ++ +Y+P+G+N +P R ++W++ P+
Sbjct: 613 LRVLRDRSEKLYLPQGLNYLPKKLRLIEWDYFPM 646
>At1g55390.1 68414.m06335 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 684
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 256 DGGHVTFKTDNLTDEFIVTDTDQLVHSRSGHFFGSDDGSRYGED 125
DGGH + + D+ IV D D + R G G DG +D
Sbjct: 124 DGGHDDEDNNFVDDDVIVNDGDGVGEDRDGDSDGDGDGGDDDDD 167
>At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 383
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 366 PSKMEPKIPGPSSTDKG-FPVRSTGSPTVTPEVSSYTWM 253
P + P P PSS FPV + SPT+ P SSY M
Sbjct: 204 PLPVSPPPPLPSSHPSSLFPVTTNSSPTIPPS-SSYPQM 241
>At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 661
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 366 PSKMEPKIPGPSSTDKG-FPVRSTGSPTVTPEVSSYTWM 253
P + P P PSS FPV + SPT+ P SSY M
Sbjct: 204 PLPVSPPPPLPSSHPSSLFPVTTNSSPTIPPS-SSYPQM 241
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 404 QSIYIPKGINVPSLAREVDWEFNPLNVKVGSHI 502
+S+ P+G N+PS R++D + N N +GS +
Sbjct: 163 RSVDPPRGRNIPSSRRKIDVDNNNYNHTLGSSV 195
>At3g29200.1 68416.m03662 chorismate mutase, chloroplast (CM1)
identical to chorismate mutase GB:Z26519 [SP|P42738]
[Arabidopsis thaliana]
Length = 340
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -2
Query: 214 EFIVTDTDQLVHSRSGHFFGSDDGSRYGEDISEPLL 107
E++V T++L H++ G F D+ + +D+ EP+L
Sbjct: 135 EYMVKGTEKL-HAKVGRFKSPDEHPFFPDDLPEPML 169
>At3g01040.1 68416.m00005 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 533
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 332 LGPGILGSIFDGIQRPLKDINELTQSI---YIPKGINVP 439
LGP +LG I D QR ++D ++ + IP G+ +P
Sbjct: 77 LGPRLLGRIDDSEQRLVRDFYKILNEVSTQEIPDGLKLP 115
>At2g41820.1 68415.m05168 leucine-rich repeat transmembrane protein
kinase, putative
Length = 890
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 191 VRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGK 316
+R+G NELVG I R G+++ + +E G+ V K
Sbjct: 259 IRIGNNELVGVIPRTIGNISGLTYFEADKNNLSGEIVAEFSK 300
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 366 PSKMEPKIPGPSSTDKGFPVRSTGSPTV-TPEVSS 265
P PK+P PS P S SP+V TP V S
Sbjct: 42 PKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPS 76
>At3g16820.1 68416.m02148 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box
protein interaction domain
Length = 313
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 247 HVTFKTDNLTDEFIVTDTDQLVHSRSGHFFGSDDG 143
HV+F D +V D D+ SR+ +F DDG
Sbjct: 250 HVSFFIDKKNKVVVVLDKDKETRSRNLGYFIGDDG 284
>At2g39730.3 68415.m04879 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 441
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 238 FKTDNLTDEFIVTDTDQLVHSRSGHFFGSDDGSRYGEDI 122
F+TD + DE IVT DQ +S FFG+ Y +++
Sbjct: 320 FRTDKIKDEDIVTLVDQF-PGQSIDFFGALRARVYDDEV 357
>At2g39730.2 68415.m04878 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 446
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 238 FKTDNLTDEFIVTDTDQLVHSRSGHFFGSDDGSRYGEDI 122
F+TD + DE IVT DQ +S FFG+ Y +++
Sbjct: 320 FRTDKIKDEDIVTLVDQF-PGQSIDFFGALRARVYDDEV 357
>At2g39730.1 68415.m04877 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 474
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 238 FKTDNLTDEFIVTDTDQLVHSRSGHFFGSDDGSRYGEDI 122
F+TD + DE IVT DQ +S FFG+ Y +++
Sbjct: 320 FRTDKIKDEDIVTLVDQF-PGQSIDFFGALRARVYDDEV 357
>At2g01690.2 68415.m00097 expressed protein
Length = 744
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 433 VDTLGDVDGLSQLVDVLEGTLNTVKDGTQDTR 338
+D++ D+D L L D L+G N + D + + R
Sbjct: 201 LDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIR 232
>At2g01690.1 68415.m00096 expressed protein
Length = 743
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 433 VDTLGDVDGLSQLVDVLEGTLNTVKDGTQDTR 338
+D++ D+D L L D L+G N + D + + R
Sbjct: 200 LDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIR 231
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,539,377
Number of Sequences: 28952
Number of extensions: 235074
Number of successful extensions: 792
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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