Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314G10f
(360 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p pro... 29 2.4
AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-P... 29 2.4
BT012320-1|AAS77445.1| 710|Drosophila melanogaster AT31725p pro... 28 4.1
BT011551-1|AAS15687.1| 710|Drosophila melanogaster GH02593p pro... 28 4.1
AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p pro... 28 4.1
AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA pr... 28 4.1
AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA p... 28 4.1
AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-P... 28 4.1
AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-P... 28 4.1
AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-P... 28 4.1
AE013599-415|AAG22309.1| 710|Drosophila melanogaster CG11141-PB... 28 4.1
AE013599-414|AAF59251.1| 710|Drosophila melanogaster CG11141-PA... 28 4.1
AY113630-1|AAM29635.1| 117|Drosophila melanogaster RH71704p pro... 27 9.5
AY070956-1|AAL48578.1| 117|Drosophila melanogaster RE05591p pro... 27 9.5
AE013599-2890|AAF57557.1| 117|Drosophila melanogaster CG9291-PB... 27 9.5
AE013599-2889|AAF57558.3| 117|Drosophila melanogaster CG9291-PA... 27 9.5
AB007693-1|BAA24287.1| 98|Drosophila melanogaster Elongin C pr... 27 9.5
>AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p
protein.
Length = 1073
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 256 PISHKCAERTHSAERRTVRGSDVHMF-NFHINRIIRNTN 143
PI+H A++ H R GSDV + N H + RN++
Sbjct: 709 PINHSHAQQQHQRNRAATSGSDVSVVRNEHTQGLNRNSS 747
>AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-PA
protein.
Length = 1059
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 256 PISHKCAERTHSAERRTVRGSDVHMF-NFHINRIIRNTN 143
PI+H A++ H R GSDV + N H + RN++
Sbjct: 695 PINHSHAQQQHQRNRAATSGSDVSVVRNEHTQGLNRNSS 733
>BT012320-1|AAS77445.1| 710|Drosophila melanogaster AT31725p
protein.
Length = 710
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 195 LPRTVRLSAECVLSAHLWEIGHSAVHTCVVACTLW 299
LPR + L A C S + +H CVV+C W
Sbjct: 109 LPRDLDLVAPCTKSRPIERYTIRDLHKCVVSCCEW 143
>BT011551-1|AAS15687.1| 710|Drosophila melanogaster GH02593p
protein.
Length = 710
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 195 LPRTVRLSAECVLSAHLWEIGHSAVHTCVVACTLW 299
LPR + L A C S + +H CVV+C W
Sbjct: 109 LPRDLDLVAPCTKSRPIERYTIRDLHKCVVSCCEW 143
>AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p
protein.
Length = 878
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 201 GGATYTCLIFISIE*SGIQITNLLQKHNTSKSSRCT 94
GG +TC++ ++ + + +++H+T K CT
Sbjct: 273 GGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACT 308
>AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA
protein.
Length = 891
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 201 GGATYTCLIFISIE*SGIQITNLLQKHNTSKSSRCT 94
GG +TC++ ++ + + +++H+T K CT
Sbjct: 273 GGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACT 308
>AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA
protein.
Length = 962
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 201 GGATYTCLIFISIE*SGIQITNLLQKHNTSKSSRCT 94
GG +TC++ ++ + + +++H+T K CT
Sbjct: 273 GGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACT 308
>AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-PA,
isoform A protein.
Length = 962
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 201 GGATYTCLIFISIE*SGIQITNLLQKHNTSKSSRCT 94
GG +TC++ ++ + + +++H+T K CT
Sbjct: 273 GGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACT 308
>AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-PB,
isoform B protein.
Length = 891
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 201 GGATYTCLIFISIE*SGIQITNLLQKHNTSKSSRCT 94
GG +TC++ ++ + + +++H+T K CT
Sbjct: 273 GGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACT 308
>AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-PD,
isoform D protein.
Length = 878
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 201 GGATYTCLIFISIE*SGIQITNLLQKHNTSKSSRCT 94
GG +TC++ ++ + + +++H+T K CT
Sbjct: 273 GGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACT 308
>AE013599-415|AAG22309.1| 710|Drosophila melanogaster CG11141-PB,
isoform B protein.
Length = 710
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 195 LPRTVRLSAECVLSAHLWEIGHSAVHTCVVACTLW 299
LPR + L A C S + +H CVV+C W
Sbjct: 109 LPRDLDLVAPCTKSRPIERYTIRDLHKCVVSCCEW 143
>AE013599-414|AAF59251.1| 710|Drosophila melanogaster CG11141-PA,
isoform A protein.
Length = 710
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 195 LPRTVRLSAECVLSAHLWEIGHSAVHTCVVACTLW 299
LPR + L A C S + +H CVV+C W
Sbjct: 109 LPRDLDLVAPCTKSRPIERYTIRDLHKCVVSCCEW 143
>AY113630-1|AAM29635.1| 117|Drosophila melanogaster RH71704p
protein.
Length = 117
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 342 ENMYRNVYF--IGNHITTEYRLRHTYVLRYVRSPINVPKERIRPK 214
EN V+F I +H+ + + TY +RY S +P+ I P+
Sbjct: 59 ENEANEVHFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPE 103
>AY070956-1|AAL48578.1| 117|Drosophila melanogaster RE05591p
protein.
Length = 117
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 342 ENMYRNVYF--IGNHITTEYRLRHTYVLRYVRSPINVPKERIRPK 214
EN V+F I +H+ + + TY +RY S +P+ I P+
Sbjct: 59 ENEANEVHFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPE 103
>AE013599-2890|AAF57557.1| 117|Drosophila melanogaster CG9291-PB,
isoform B protein.
Length = 117
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 342 ENMYRNVYF--IGNHITTEYRLRHTYVLRYVRSPINVPKERIRPK 214
EN V+F I +H+ + + TY +RY S +P+ I P+
Sbjct: 59 ENEANEVHFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPE 103
>AE013599-2889|AAF57558.3| 117|Drosophila melanogaster CG9291-PA,
isoform A protein.
Length = 117
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 342 ENMYRNVYF--IGNHITTEYRLRHTYVLRYVRSPINVPKERIRPK 214
EN V+F I +H+ + + TY +RY S +P+ I P+
Sbjct: 59 ENEANEVHFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPE 103
>AB007693-1|BAA24287.1| 98|Drosophila melanogaster Elongin C
protein.
Length = 98
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 342 ENMYRNVYF--IGNHITTEYRLRHTYVLRYVRSPINVPKERIRPK 214
EN V+F I +H+ + + TY +RY S +P+ I P+
Sbjct: 40 ENEANEVHFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPE 84
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,699,545
Number of Sequences: 53049
Number of extensions: 292050
Number of successful extensions: 646
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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