Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314G08f
         (460 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   2.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   4.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 401 CGVGGVCCSYWRGI 360
           CGV G+ CS+ R I
Sbjct: 542 CGVKGIPCSWGRAI 555


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 300 QHMGQLQHSVLQLRKELRSAQQQQ 229
           QH  Q Q   LQ  ++    QQQQ
Sbjct: 185 QHQSQAQQQHLQAHEQHMMYQQQQ 208


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = -3

Query: 296 IWASCSIACC 267
           +W +C + CC
Sbjct: 111 LWLTCDVLCC 120


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = -3

Query: 296 IWASCSIACC 267
           +W +C + CC
Sbjct: 111 LWLTCDVLCC 120


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = -3

Query: 296 IWASCSIACC 267
           +W +C + CC
Sbjct: 111 LWLTCDVLCC 120


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 321 QKMELCRQHMGQLQHSVLQLRKELRSAQQQQVRE 220
           Q+M+  +QH  Q Q +   +  +    QQQQ ++
Sbjct: 416 QQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQ 449



 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -2

Query: 327 RLQKMELCRQHMGQLQHSVLQLRKELRSAQQQQVRE 220
           ++Q  +  +Q   Q QH +   + + +  QQQQ ++
Sbjct: 417 QMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQ 452


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,689
Number of Sequences: 438
Number of extensions: 1204
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)