Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314G04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80445-1|AAB37794.1|  855|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U64599-9|AAL65791.1|  782|Caenorhabditis elegans Regulator of g ...    29   2.0  
U64599-7|AAL11462.1|  819|Caenorhabditis elegans Regulator of g ...    29   2.0  
AY569308-1|AAS75452.1|  819|Caenorhabditis elegans RGS-7A protein.     29   2.0  
AB080201-1|BAB85494.1|  782|Caenorhabditis elegans C2-RGS protei...    29   2.0  
CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z99281-4|CAB16509.1|  571|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z49913-2|CAA90143.1|  660|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U41546-6|AAC48223.1|  798|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U80445-1|AAB37794.1|  855|Caenorhabditis elegans Hypothetical
           protein C50F2.3 protein.
          Length = 855

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +3

Query: 285 NFNKLWERIQR-INTIKVTDSAGQVRDIWVRYVRDYPVENNDWGDFQTHRRLLGLITLSK 461
           N+NK  E  +  + ++      G+VRD+W+   + Y  E+N  GD    R+      +S+
Sbjct: 376 NYNKQIETFKEAVKSVNPKIQVGKVRDLWIGLAKLY--EDN--GDLDAARKTFETAVISQ 431

Query: 462 FTNQVEL 482
           F    EL
Sbjct: 432 FGGVSEL 438


>U64599-9|AAL65791.1|  782|Caenorhabditis elegans Regulator of g
           protein signalingprotein 7, isoform b protein.
          Length = 782

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 179 SRPRRICDVSSRLWAARPTSRMPSSARQGNRRHVEKFQ*TLGANTENQHY 328
           +RP  +C   S +   RP+S+  SS+RQ  +R  E ++  L  N  +  +
Sbjct: 286 ARPTSVCSYVSAVLCHRPSSQSSSSSRQYRQRPDECYRTRLVTNCNSPSF 335


>U64599-7|AAL11462.1|  819|Caenorhabditis elegans Regulator of g
           protein signalingprotein 7, isoform a protein.
          Length = 819

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 179 SRPRRICDVSSRLWAARPTSRMPSSARQGNRRHVEKFQ*TLGANTENQHY 328
           +RP  +C   S +   RP+S+  SS+RQ  +R  E ++  L  N  +  +
Sbjct: 323 ARPTSVCSYVSAVLCHRPSSQSSSSSRQYRQRPDECYRTRLVTNCNSPSF 372


>AY569308-1|AAS75452.1|  819|Caenorhabditis elegans RGS-7A protein.
          Length = 819

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 179 SRPRRICDVSSRLWAARPTSRMPSSARQGNRRHVEKFQ*TLGANTENQHY 328
           +RP  +C   S +   RP+S+  SS+RQ  +R  E ++  L  N  +  +
Sbjct: 323 ARPTSVCSYVSAVLCHRPSSQSSSSSRQYRQRPDECYRTRLVTNCNSPSF 372


>AB080201-1|BAB85494.1|  782|Caenorhabditis elegans C2-RGS protein
           protein.
          Length = 782

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 179 SRPRRICDVSSRLWAARPTSRMPSSARQGNRRHVEKFQ*TLGANTENQHY 328
           +RP  +C   S +   RP+S+  SS+RQ  +R  E ++  L  N  +  +
Sbjct: 286 ARPTSVCSYVSAVLCHRPSSQSSSSSRQYRQRPDECYRTRLVTNCNSPSF 335


>CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical
           protein C42C1.8 protein.
          Length = 544

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -1

Query: 410 PIIILNRVVSDIAYPYISYLPCGVS 336
           PI +L + ++ +AYP+I +LP  +S
Sbjct: 181 PICLLGQSIAAMAYPFIMFLPSKIS 205


>Z99281-4|CAB16509.1|  571|Caenorhabditis elegans Hypothetical
           protein Y57G11C.7 protein.
          Length = 571

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 77  NGCKTQIT*HRLHSSENRIIK*DINALFSELYIVSR-PR-RICDVSSRL 217
           +GC  Q T  RL   E  I K  +NA+  +L ++ + P+ R  DV S L
Sbjct: 32  SGCLVQFTVQRLPRPEKHIEKNALNAMLDDLAVIMKNPKLRFSDVISIL 80


>Z49913-2|CAA90143.1|  660|Caenorhabditis elegans Hypothetical
           protein ZK938.3 protein.
          Length = 660

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 363 IWVR-YVRDYPVENNDWGDFQTHRRLLGLITL 455
           I++R Y + YP     +G  QT  RLL L+TL
Sbjct: 58  IYIRMYSKLYPTSPKFYGTHQTKERLLHLVTL 89


>U41546-6|AAC48223.1|  798|Caenorhabditis elegans Hypothetical
           protein T25B6.2 protein.
          Length = 798

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 33  INKIQNKSPAISWFRMDAKHRSHNTGSTVVK 125
           IN  Q    +++W    +K+R+HN   ++VK
Sbjct: 467 INNFQGMIDSLNWMDTFSKNRAHNKSDSLVK 497


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,184,714
Number of Sequences: 27780
Number of extensions: 245402
Number of successful extensions: 664
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)