Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314G03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   0.71 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   2.9  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   2.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.8  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 14/59 (23%), Positives = 23/59 (38%)
 Frame = +1

Query: 202 TAQPRNSGHSHGHETSYNY*IRRISETGDKERAAVVRGFNIARVLYSDGRAPTCTSRSW 378
           T   RN G +HG +  Y + +     + +    A+V+ F      +SD   P      W
Sbjct: 434 TESGRNFGAAHGDDVPYIFNMGLFDTSRNHRDRAMVKIFVDLLTSFSDSSIPKVKEIEW 492


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 274 SETGDKERAAVVRGFNIARVLYSD 345
           SE G   RA  V G+N    LYSD
Sbjct: 287 SEAGPYTRAMGVIGYNEVCELYSD 310


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 274 SETGDKERAAVVRGFNIARVLYSD 345
           SE G   RA  V G+N    LYSD
Sbjct: 287 SEAGPYTRAMGVIGYNEVCELYSD 310


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 196 GRTAQP-RNSGHSHGHETS 249
           G T+QP  ++ H H H+TS
Sbjct: 122 GATSQPPTDNSHVHHHQTS 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,818
Number of Sequences: 336
Number of extensions: 2104
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)