Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314G02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I1R4 Cluster: Putative uncharacterized protein PFD084...    34   2.3  
UniRef50_Q22GW2 Cluster: TPR Domain containing protein; n=1; Tet...    33   3.0  
UniRef50_Q41GF4 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_A0BL52 Cluster: Chromosome undetermined scaffold_113, w...    33   5.2  
UniRef50_A3IK96 Cluster: Putative uncharacterized protein; n=2; ...    32   9.2  

>UniRef50_Q8I1R4 Cluster: Putative uncharacterized protein PFD0840w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFD0840w - Plasmodium falciparum
            (isolate 3D7)
          Length = 2031

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
 Frame = -1

Query: 299  KHKYYIYSTINKLFIL--HTKL*YFRILVYSIFH-VYR---NQNFQIHFNVISIIL 150
            K   YI+S I  +++L  H K  +  I  +S F  VY+   N+ +QI  NVIS+IL
Sbjct: 978  KKNIYIFSKITNIYMLLKHNKKVHLLICPFSFFFSVYKEKKNKKYQIKLNVISLIL 1033


>UniRef50_Q22GW2 Cluster: TPR Domain containing protein; n=1;
            Tetrahymena thermophila SB210|Rep: TPR Domain containing
            protein - Tetrahymena thermophila SB210
          Length = 1933

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 17/82 (20%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
 Frame = +3

Query: 156  DRYYIKMNLEVL---ITVNVENGIHQYSKISKFCMQNKQFINCAIDIIFVLGYS--QQEK 320
            ++ +  +N+E+      +N + G+H Y +++K C + K++ N  + I+  L     ++ K
Sbjct: 1540 EKEFSNLNIEIARIYSDLNNKFGLHIYRELAKVCQELKEYQNAYMLILSQLKNEAIEESK 1599

Query: 321  *LVQVSKVIRTNKLAIKR*MLI 386
             +++  + + TN + +K  +L+
Sbjct: 1600 KIIKFLRTVETNSVTVKEELLL 1621


>UniRef50_Q41GF4 Cluster: Putative uncharacterized protein; n=1;
           Exiguobacterium sibiricum 255-15|Rep: Putative
           uncharacterized protein - Exiguobacterium sibiricum
           255-15
          Length = 496

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
 Frame = -1

Query: 236 YFRILVYSIFHVYRNQNFQIHFNVISIILVFQAVRMIFALVKI---HDALKEFLRI 78
           Y  I+ YSI  +Y+N NF I  ++  +++VF  +R++F L K    H  +K+ +++
Sbjct: 105 YKTIVDYSI--LYKNMNFSIILSIYELMIVFLVMRVMFFLEKFTSNHIVIKDKVKL 158


>UniRef50_A0BL52 Cluster: Chromosome undetermined scaffold_113, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_113, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2265

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 287  NICAWVLSTRKVTCSG**GNKNKQTCNKKINVNISCCSLGSK--TSESCIS 433
            NIC W  S R   CS   G+ N Q CN K++   SC S G+K  T ++C S
Sbjct: 1984 NICVWDGSCRNQACSDISGS-NHQYCNSKMS---SCTSDGTKCMTIQTCES 2030


>UniRef50_A3IK96 Cluster: Putative uncharacterized protein; n=2;
           Chroococcales|Rep: Putative uncharacterized protein -
           Cyanothece sp. CCY 0110
          Length = 390

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -1

Query: 236 YFRILVYSIFHVYRNQNFQIHFNVISIILVFQAVRMIFALVKIHDALKEFLRI 78
           YF+IL++ +F   +++NF    N++   L+  +V + F   K    +  F RI
Sbjct: 3   YFKILLFKMFITDQDKNFNNLINILISTLIVFSVTLYFYFFKFDGNITGFFRI 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,846,325
Number of Sequences: 1657284
Number of extensions: 8251742
Number of successful extensions: 17440
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17432
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)