Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314G01f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1162 - 9253034-9254229,9254387-9254456,9254473-9254567,925...    32   0.32 
10_06_0182 - 11552540-11552606,11552692-11552787,11553458-115535...    29   2.3  
07_01_1054 + 9250298-9250428,9250889-9251489                           28   4.0  
08_02_1493 + 27512473-27512557,27512670-27513351,27513459-275135...    28   5.2  
08_02_1239 + 25491034-25492378,25493719-25494575                       27   6.9  
12_02_1092 - 26011445-26012071,26012826-26014022,26014083-260142...    27   9.1  
09_04_0475 - 17913982-17914772,17914830-17915156,17915323-179154...    27   9.1  

>01_01_1162 -
           9253034-9254229,9254387-9254456,9254473-9254567,
           9255344-9255487,9255514-9255622
          Length = 537

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 232 WSRPGLFTRIVNCALKALPLL-GPSCK 155
           WSRP  F R V  A ++ P+L  PSC+
Sbjct: 305 WSRPARFVRSVRAAFRSFPILPAPSCR 331


>10_06_0182 -
           11552540-11552606,11552692-11552787,11553458-11553528,
           11553660-11553764,11554149-11554239,11554331-11554381,
           11554478-11554566,11554667-11554909,11555027-11555190,
           11555883-11555988,11556075-11556242,11557456-11557494,
           11557582-11557713
          Length = 473

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/58 (25%), Positives = 22/58 (37%)
 Frame = +3

Query: 153 HLQEGPSSGSAFKAQFTIRVKSPGRLQAKLENPQHGNFNEQLPDPRELPVDLKYQPTP 326
           H++EG  +G  FK    + + +P     K   P H      +P P      L   P P
Sbjct: 187 HVEEGDINGGGFKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPIVSKYKLHLPPYP 244


>07_01_1054 + 9250298-9250428,9250889-9251489
          Length = 243

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +3

Query: 102 WQVGKQYRYEVTSRTLAHLQEGPSSGSAFKAQFTIRVKSPGRLQAKLENP 251
           W V   +R E++ R  +  + GP+  ++   Q T+R ++P R  + L +P
Sbjct: 11  WSV--HWRAELSYRCQSSAEPGPAQQASSFGQVTVRSRTPSRTTSILPHP 58


>08_02_1493 +
           27512473-27512557,27512670-27513351,27513459-27513522,
           27513734-27513961
          Length = 352

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 169 GPSCKCAKVREVTSYRYCLPTCQGDGYVCP 80
           G  C C  +  + S+  CL  C GD   CP
Sbjct: 308 GDGCNCGIMAGILSFPICLGNCSGDP-ACP 336


>08_02_1239 + 25491034-25492378,25493719-25494575
          Length = 733

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 112 PTCQGDGYVCPPVDWLWLLNR 50
           P C  DG+ C  VDW+W L+R
Sbjct: 594 PRCDIDGF-CFLVDWVWRLHR 613


>12_02_1092 -
           26011445-26012071,26012826-26014022,26014083-26014286,
           26014316-26014385,26014440-26014479,26015566-26015632,
           26015718-26015740,26017985-26018081,26018553-26018614,
           26018913-26019297,26019924-26020007,26020383-26020467,
           26020579-26020790,26020881-26021030
          Length = 1100

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 326 RRRLVLEINRQFPRVRELLIEVTMLWIL 243
           +RRL+ EI+R  P  R L+    +LW+L
Sbjct: 728 QRRLLEEIDRMLPLQRGLISTNVLLWLL 755


>09_04_0475 -
          17913982-17914772,17914830-17915156,17915323-17915493,
          17915583-17915824,17915862-17916049,17916184-17916253,
          17916329-17916612
          Length = 690

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 92 ICLSACGLALAAKPIRGHGGYNCR 21
          IC+SA G+  A  P+ GH G   R
Sbjct: 12 ICVSAIGMVAADVPVAGHPGCQTR 35


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,936,640
Number of Sequences: 37544
Number of extensions: 299436
Number of successful extensions: 832
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)