Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314G01f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023177-1|BAA76804.2| 1502|Homo sapiens KIAA0960 protein protein.     31   3.2  
BC021217-1|AAH21217.2|  473|Homo sapiens NADH dehydrogenase (ubi...    29   7.5  
AK056041-1|BAB71080.1|  456|Homo sapiens protein ( Homo sapiens ...    29   7.5  
AL606468-1|CAH70697.1|  730|Homo sapiens denticleless homolog (D...    29   9.9  
AL592297-1|CAH73803.1|  730|Homo sapiens denticleless homolog (D...    29   9.9  

>AB023177-1|BAA76804.2| 1502|Homo sapiens KIAA0960 protein protein.
          Length = 1502

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -2

Query: 220 GLFTRIVNCALKALPLLGPSCKCAKVREVTSYRYCLPTCQGDGYVCPPVDW 68
           G+ TR V C    +  +GP  KC +     + R CL  C+ D  V P  DW
Sbjct: 576 GMQTRKVICVRVNVGQVGPK-KCPESLRPETVRPCLLPCKKDCIVTPYSDW 625


>BC021217-1|AAH21217.2|  473|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 3, 10kDa protein.
          Length = 473

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 9/137 (6%)
 Frame = +3

Query: 117 QYRYEVTSRTLAHLQEG---PSSGSAFKAQFTIRVKSPGRLQAKLENPQHGNFNEQLPDP 287
           Q  +EV      H + G   P  GS   A      ++ G+LQA       G+  + +P+P
Sbjct: 282 QKPFEVKGPLPVHTKSGLSAPPKGSPAPAVLAEEARAEGQLQASPPGAAEGHLEKPVPEP 341

Query: 288 -RELPVDLKYQPTPNIDKVFEIEIDGGR-IVSLDFPTS----VPVPQENLIKGLISALQL 449
            R+    L  + T     + E  + GG+ IV    P S    VPV   +      +AL+L
Sbjct: 342 QRKAAPPLPRKETSGTQGI-EGHLKGGQAIVEDQIPPSNLETVPVENNHGFHEKTAALKL 400

Query: 450 DTSAHRVIHDSQNNYDR 500
           +     +   +    DR
Sbjct: 401 EAEGEAMEDAAAPGNDR 417


>AK056041-1|BAB71080.1|  456|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31479 fis, clone NT2NE2001634, moderately
           similar to NADH-UBIQUINONE OXIDOREDUCTASE 9 KD SUBUNIT
           PRECURSOR ).
          Length = 456

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 9/137 (6%)
 Frame = +3

Query: 117 QYRYEVTSRTLAHLQEG---PSSGSAFKAQFTIRVKSPGRLQAKLENPQHGNFNEQLPDP 287
           Q  +EV      H + G   P  GS   A      ++ G+LQA       G+  + +P+P
Sbjct: 265 QKPFEVKGPLPVHTKSGLSAPPKGSPAPAVLAEEARAEGQLQASPPGAAEGHLEKPVPEP 324

Query: 288 -RELPVDLKYQPTPNIDKVFEIEIDGGR-IVSLDFPTS----VPVPQENLIKGLISALQL 449
            R+    L  + T     + E  + GG+ IV    P S    VPV   +      +AL+L
Sbjct: 325 QRKAAPPLPRKETSGTQGI-EGHLKGGQAIVEDQIPPSNLETVPVENNHGFHEKTAALKL 383

Query: 450 DTSAHRVIHDSQNNYDR 500
           +     +   +    DR
Sbjct: 384 EAEGEAMEDAAAPGNDR 400


>AL606468-1|CAH70697.1|  730|Homo sapiens denticleless homolog
           (Drosophila) protein.
          Length = 730

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 229 SRPGLFTRIVNCALKALPLLGPSCKCAKVREVTSYRYCLPTCQGD 95
           SRPGL T   +   ++ P   P  KC       S   C P+C GD
Sbjct: 416 SRPGLVTVTSS---QSTPAKAPRAKCNPSNSSPSSAACAPSCAGD 457


>AL592297-1|CAH73803.1|  730|Homo sapiens denticleless homolog
           (Drosophila) protein.
          Length = 730

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 229 SRPGLFTRIVNCALKALPLLGPSCKCAKVREVTSYRYCLPTCQGD 95
           SRPGL T   +   ++ P   P  KC       S   C P+C GD
Sbjct: 416 SRPGLVTVTSS---QSTPAKAPRAKCNPSNSSPSSAACAPSCAGD 457


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,249,894
Number of Sequences: 237096
Number of extensions: 1640640
Number of successful extensions: 4157
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4157
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)