Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314F12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   145   4e-35
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   145   4e-35
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   145   4e-35
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   145   4e-35
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   145   4e-35
AY122064-1|AAM52576.1|  641|Drosophila melanogaster AT07222p pro...    30   2.2  
AE014297-1404|AAF54718.1|  641|Drosophila melanogaster CG14731-P...    30   2.2  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  145 bits (351), Expect = 4e-35
 Identities = 68/106 (64%), Positives = 78/106 (73%)
 Frame = +1

Query: 154 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 333
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 334 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPQRXPT 471
           KTTA  LFK+LEKYRPE+                   D  P++ P+
Sbjct: 94  KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 31.1 bits (67), Expect = 0.95
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 459 KXPNTIRSGTNTVTKLVEKK 518
           K P+ + +GTNTVTKL+E+K
Sbjct: 136 KKPSYVSAGTNTVTKLIEQK 155


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  145 bits (351), Expect = 4e-35
 Identities = 68/106 (64%), Positives = 78/106 (73%)
 Frame = +1

Query: 154 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 333
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 334 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPQRXPT 471
           KTTA  LFK+LEKYRPE+                   D  P++ P+
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 31.1 bits (67), Expect = 0.95
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 459 KXPNTIRSGTNTVTKLVEKK 518
           K P+ + +GTNTVTKL+E+K
Sbjct: 136 KKPSYVSAGTNTVTKLIEQK 155


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  145 bits (351), Expect = 4e-35
 Identities = 68/106 (64%), Positives = 78/106 (73%)
 Frame = +1

Query: 154 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 333
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 334 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPQRXPT 471
           KTTA  LFK+LEKYRPE+                   D  P++ P+
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 31.1 bits (67), Expect = 0.95
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 459 KXPNTIRSGTNTVTKLVEKK 518
           K P+ + +GTNTVTKL+E+K
Sbjct: 136 KKPSYVSAGTNTVTKLIEQK 155


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  145 bits (351), Expect = 4e-35
 Identities = 68/106 (64%), Positives = 78/106 (73%)
 Frame = +1

Query: 154 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 333
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 334 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPQRXPT 471
           KTTA  LFK+LEKYRPE+                   D  P++ P+
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 31.1 bits (67), Expect = 0.95
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 459 KXPNTIRSGTNTVTKLVEKK 518
           K P+ + +GTNTVTKL+E+K
Sbjct: 136 KKPSYVSAGTNTVTKLIEQK 155


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  145 bits (351), Expect = 4e-35
 Identities = 68/106 (64%), Positives = 78/106 (73%)
 Frame = +1

Query: 154 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 333
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 334 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPQRXPT 471
           KTTA  LFK+LEKYRPE+                   D  P++ P+
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 31.1 bits (67), Expect = 0.95
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 459 KXPNTIRSGTNTVTKLVEKK 518
           K P+ + +GTNTVTKL+E+K
Sbjct: 136 KKPSYVSAGTNTVTKLIEQK 155


>AY122064-1|AAM52576.1|  641|Drosophila melanogaster AT07222p
           protein.
          Length = 641

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 474 WCWASLGRLIFLGNLSFSSFPQP 406
           WCW   GRL++     F  FP P
Sbjct: 166 WCWMDYGRLVYHDVFIFLPFPNP 188


>AE014297-1404|AAF54718.1|  641|Drosophila melanogaster CG14731-PA
           protein.
          Length = 641

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 474 WCWASLGRLIFLGNLSFSSFPQP 406
           WCW   GRL++     F  FP P
Sbjct: 166 WCWMDYGRLVYHDVFIFLPFPNP 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,919,929
Number of Sequences: 53049
Number of extensions: 391982
Number of successful extensions: 1453
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)